RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 STAG2Q8N3U4 1231 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CCNYQ8ND76 341 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DDHD1Q8NEL9 900 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TBCKQ8TEA7 893 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 ADA2Q9NZK5 511 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SEL1LQ9UBV2 794 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 FRMPD2Q68DX3 1309 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 RSPH10B2B2RC85 870 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 RSPH10BP0C881 870 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 GHRP10912 638 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CHN1P15882 459 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PSMA2P25787 234 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 TRIP13Q15645 432 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 PTGISQ16647 500 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ERICH1Q86X53 443 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SUGP1Q8IWZ8 645 aaKnown RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 FAM210AQ96ND0 272 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CALN1Q9BXU9 219 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SAMD9LQ8IVG5 1584 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 ADGRA3Q8IWK6 1321 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SSU72P8A0A1W2PR75 194 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SPDYE16A6NNV3 312 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 DDIT3P35638 169 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SPDYE2Q495Y8 402 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CCDC137Q6PK04 289 aaKnown RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 METTL23Q86XA0 190 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 GRAMD1CQ8IYS0 662 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 NGLY1Q96IV0 654 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PGBD1Q96JS3 809 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CNPY3Q9BT09 278 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 MLXIPQ9HAP2 919 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.36□□□□□ -1.234e-7■■□□□ 11.5
SORT1-209ENST00000538502 ADAMTS1Q9UHI8 967 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DNAJC12Q9UKB3 198 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 IVNS1ABPQ9Y6Y0 642 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CFAP69A5D8W1 941 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PSMD3O43242 534 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 LRRN2O75325 713 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 SERPINB3P29508 390 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 WLSQ5T9L3 541 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 NFRKBQ6P4R8 1299 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 MTHFD1LQ6UB35 978 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 DPP8Q6V1X1 898 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 RHOT1Q8IXI2 618 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CMTR1Q8N1G2 835 aaKnown RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 NOD2Q9HC29 1040 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 PCDHB6Q9Y5E3 794 aa7.36□□□□□ -1.23
SORT1-209ENST00000538502 CDK12Q9NYV4 1490 aaPredicted RBP7.36□□□□□ -1.23
SORT1-209ENST00000538502 USP27XA6NNY8 438 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 CDH16O75309 829 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 KRT14P02533 472 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ATP1A1P05023 1023 aaKnown RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.35□□□□□ -1.23
SORT1-209ENST00000538502 NAALADL2Q58DX5 795 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 TRIM69Q86WT6 500 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 COL23A1Q86Y22 540 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 GLG1Q92896 1179 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ALDH1B1P30837 517 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ARID5BQ14865 1188 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 C4orf22Q6V702 233 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 FRMD5Q7Z6J6 570 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ZNF564Q8TBZ8 553 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 NEUROG2Q9H2A3 272 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 CNOT8Q9UFF9 292 aaKnown RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 PCDHA1Q9Y5I3 950 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 SLC16A3O15427 465 aaKnown RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 IRAK1P51617 712 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 GFPT1Q06210 699 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 PABPC4Q13310 644 aaKnown RBP eCLIP7.35□□□□□ -1.23
SORT1-209ENST00000538502 CERKLQ49MI3 558 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 AASDHQ4L235 1098 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 ARMCX2Q7L311 632 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 HIPK4Q8NE63 616 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 DTX3LQ8TDB6 740 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 RAD54LQ92698 747 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 TSSK1BQ9BXA7 367 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 KCNF1Q9H3M0 494 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ANAPC7Q9UJX3 599 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 GOLGA8IPA6NC78 632 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 FAM47DPA6NHR8 397 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 LRRIQ4A6NIV6 560 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 SNX2O60749 519 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 H2AFYO75367 372 aaKnown RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 CCND2P30279 289 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 DYNLT1P63172 113 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 TNFAIP1Q13829 316 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 SLFN13Q68D06 897 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 CYB5D1Q6P9G0 228 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 NDUFAF2Q8N183 169 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 ATL2Q8NHH9 583 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 PI4K2BQ8TCG2 481 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 PPP1R2P1Q96PQ5 205 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 TRABDQ9H4I3 376 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 KIF1BO60333 1816 aa7.35□□□□□ -1.23
SORT1-209ENST00000538502 TESPA1A2RU30 521 aaPredicted RBP7.35□□□□□ -1.23
SORT1-209ENST00000538502 WDR64B1ANS9 1081 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms