RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DENND3A2RUS2 1198 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ANKRD62A6NC57 917 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CHMP2AO43633 222 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 GTPBP6O43824 516 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SEC24BO95487 1268 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 EOMESO95936 686 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PGK1P00558 417 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 C1RP00736 705 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SSBP05455 408 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 TPM3P06753 285 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 INSRRP14616 1297 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CD151P48509 253 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 VASPP50552 380 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PLCB4Q15147 1175 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 LY6KQ17RY6 165 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 C11orf91Q3C1V1 193 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 NOTUMQ6P988 496 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CXCL17Q6UXB2 119 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CATSPER4Q7RTX7 472 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CACTIN-AS1Q8N1I8 211 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 METTL13Q8N6R0 699 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 IGSF22Q8N9C0 903 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 NOC3LQ8WTT2 800 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 LARP4BQ92615 738 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 UROC1Q96N76 676 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FAM193BQ96PV7 902 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MTMR9Q96QG7 549 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ZBED2Q9BTP6 218 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MRPL4Q9BYD3 311 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CELF4Q9BZC1 486 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 UBE2OQ9C0C9 1292 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MED4Q9NPJ6 270 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 EXOC1Q9NV70 894 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM260Q9NX78 707 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 COL20A1Q9P218 1284 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SLC4A7Q9Y6M7 1214 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 GSTTP1A0A1W2PQM5 241 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 hCG_1642624A0A1W2PR95 340 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MBLAC1A4D2B0 266 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ERICH4A6NGS2 130 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 OPLAHO14841 1288 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PQBP1O60828 265 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 OFD1O75665 1012 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ECEL1O95672 775 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ARP10275 920 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 UBE2HP62256 183 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 GUCY1B3Q02153 619 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SP4Q02446 784 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 EMC2Q15006 297 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MTFR1Q15390 333 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FOXR2Q6PJQ5 311 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ZPBP2Q6X784 338 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 NPAS4Q8IUM7 802 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 C7orf61Q8IZ16 206 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CACTINQ8WUQ7 758 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 NLRP7Q8WX94 980 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 DDX27Q96GQ7 796 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FGD4Q96M96 766 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ACCSQ96QU6 501 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 RPS6KC1Q96S38 1066 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 UNC45AQ9H3U1 944 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FAM124BQ9H5Z6 455 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PARVGQ9HBI0 331 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SUCLA2Q9P2R7 463 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 ZNF232Q9UNY5 417 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 VWA3AA6NCI4 1184 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 DDX39AO00148 427 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 TRAPPC3O43617 180 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CALUO43852 315 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 TDP2O95551 362 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 GNA14O95837 355 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 THPOP40225 353 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SYKP43405 635 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 YWHAEP62258 255 aaKnown RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 UBE3AQ05086 875 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 MTERF2Q49AM1 385 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CCSAPQ6IQ19 270 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PADI6Q6TGC4 694 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 GLB1LQ6UWU2 654 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 RTL10Q7L3V2 364 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FAM126BQ8IXS8 530 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 TTC30BQ8N4P2 665 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 SPATA18Q8TC71 538 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PLVAPQ9BX97 442 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 FLRT1Q9NZU1 646 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 PKD2L1Q9P0L9 805 aa3.93□□□□□ -1.78
PTPN22-211ENST00000538253 CCDC66A2RUB6 948 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM86B1E9PN63 330 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 DYNC1I1O14576 645 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 EIF3DO15371 548 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CREB3O43889 395 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SH3BP5O60239 455 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 N4BP1O75113 896 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM86B2P0C5J1 330 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 P4HA1P13674 534 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 LAG3P18627 525 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KLRC1P26715 233 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 DDIT3P35638 169 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms