RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DAW1Q8N136 415 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 XXYLT1Q8NBI6 393 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 NOA1Q8NC60 698 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 IL31RAQ8NI17 732 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP28-206ENST00000538224 ATG4CQ96DT6 458 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PBKQ96KB5 322 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 INPP4AQ96PE3 977 aaPredicted RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 TAAR1Q96RJ0 339 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PNKPQ96T60 521 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 MMS19Q96T76 1030 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SELENOOQ9BVL4 669 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 MOV10L1Q9BXT6 1211 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 UBXN6Q9BZV1 441 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 INTS2Q9H0H0 1204 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 SIX2Q9NPC8 291 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 HOMER2Q9NSB8 354 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 WRAP73Q9P2S5 460 aaPredicted RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 NAGPAQ9UK23 515 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 L1RE1Q9UN81 338 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 ADAMTS5Q9UNA0 930 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 DIS3Q9Y2L1 958 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 PCDHA10Q9Y5I2 948 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 NCANO14594 1321 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PFASO15067 1338 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 TESPA1A2RU30 521 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 SFI1A8K8P3 1242 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 KIAA0391O15091 583 aaKnown RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 SRGAP2O75044 1071 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 PALMO75781 387 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 TMEM253P0C7T8 217 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 MYCLP12524 364 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 ACTN1P12814 892 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 BRD2P25440 801 aaKnown RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 OAS2P29728 719 aaKnown RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 GTF2H1P32780 548 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 VAMP7P51809 220 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 MCCD1P59942 119 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 ARID5AQ03989 594 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 KCNA1Q09470 495 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 NNTQ13423 1086 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 CASP8Q14790 479 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 RPS6KA1Q15418 735 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 TERF2Q15554 542 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 ZC2HC1CQ53FD0 456 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 XKR9Q5GH70 373 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 MEI1Q5TIA1 1274 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 C8orf74Q6P047 294 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 SAMD7Q7Z3H4 446 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 ZNF571Q7Z3V5 609 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 HAUS6Q7Z4H7 955 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 MAP4K3Q8IVH8 894 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 GPC2Q8N158 579 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 CHST13Q8NET6 341 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 SPATA4Q8NEY3 305 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 REPS2Q8NFH8 660 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 DNERQ8NFT8 737 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 FAM71BQ8TC56 605 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 SPIRE2Q8WWL2 714 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 CTNNBL1Q8WYA6 563 aaPredicted RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 KCNN1Q92952 543 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 IFT74Q96LB3 600 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 MPHOSPH6Q99547 160 aaKnown RBP7.21□□□□□ -1.26
USP28-206ENST00000538224 ABCB6Q9NP58 842 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 FBXO40Q9UH90 709 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 NENFQ9UMX5 172 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 TFR2Q9UP52 801 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 PPME1Q9Y570 386 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 DUSP10Q9Y6W6 482 aa7.21□□□□□ -1.26
USP28-206ENST00000538224 CCDC188H7C350 402 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 TULP1O00294 542 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 BUB1O43683 1085 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 EVI5O60447 810 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 DGAT1O75907 488 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 SASH3O75995 380 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 NR3C2P08235 984 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 KLRC1P26715 233 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 COPB2P35606 906 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 TNNT3P45378 269 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 NOP2P46087 812 aaKnown RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP28-206ENST00000538224 MXI1P50539 228 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 EPHB4P54760 987 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 HMGCS2P54868 508 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 C2orf54Q08AI8 447 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 PAK2Q13177 524 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 BAATQ14032 418 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 KIF22Q14807 665 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 PPP2R5EQ16537 467 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 FAM102BQ5T8I3 360 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 MIS18BP1Q6P0N0 1132 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms