RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ITGA7Q13683 1181 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 IQCB1Q15051 598 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 IER5Q5VY09 327 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 HAUS6Q7Z4H7 955 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 KIAA0319LQ8IZA0 1049 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 RETREG2Q8NC44 543 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 TMEM161BQ8NDZ6 487 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 WNT8BQ93098 351 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 NLRP4Q96MN2 994 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 CTAGE1Q96RT6 745 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 STRA6Q9BX79 667 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 MCOLN1Q9GZU1 580 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 KMT5AQ9NQR1 393 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 PHF24Q9UPV7 400 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 USP20Q9Y2K6 914 aa17.27■□□□□ 0.35
SFSWAP-206ENST00000537582 ZMYM2Q9UBW7 1377 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 LRRIQ4A6NIV6 560 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 DNM1LO00429 736 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 CYP2C9P11712 490 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 MNX1P50219 401 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 TAS1R3Q7RTX0 852 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 SPIRE2Q8WWL2 714 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 IFT74Q96LB3 600 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 CRISPLD2Q9H0B8 497 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 MYH11P35749 1972 aa17.26■□□□□ 0.35
SFSWAP-206ENST00000537582 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 NAMPTP43490 491 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 PAK1Q13153 545 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 NCAPHQ15003 741 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 COBLL1Q53SF7 1204 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 RNF149Q8NC42 400 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 DNAJB3Q8WWF6 145 aa17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 TRMT13Q9NUP7 481 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-206ENST00000537582 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 TISP43B9A030 160 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 CABYRO75952 493 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 SGPL1O95470 568 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 TFRCP02786 760 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 EDN1P05305 212 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 MAPTP10636 758 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 DNM2P50570 870 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 ANKRD40Q6AI12 368 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 DIS3LQ8TF46 1054 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 P2RX5Q93086 422 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 KCTD10Q9H3F6 313 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 C17orf75Q9HAS0 396 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 STARD7Q9NQZ5 370 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 ARHGAP28Q9P2N2 729 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 DACH1Q9UI36 760 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 EVPLQ92817 2033 aa17.24■□□□□ 0.35
SFSWAP-206ENST00000537582 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 PSMA7O14818 248 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 EIF3DO15371 548 aaKnown RBP eCLIP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 ERCC5P28715 1186 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 GTF2BQ00403 316 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 BMT2Q1RMZ1 405 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 BPIFA3Q9BQP9 254 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 HSD3B7Q9H2F3 369 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 RWDD2AQ9UIY3 292 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 TRIP12Q14669 1992 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 A0A087WZ62 844 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 SMIM35A0A1B0GVV1 85 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 CCNE1P24864 410 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 TMOD1P28289 359 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 SMTNP53814 917 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 STIM1Q13586 685 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 MXD4Q14582 209 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 ZCWPW2Q504Y3 356 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 FDXACB1Q9BRP7 624 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 TRPV6Q9H1D0 765 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 ST6GALNAC4Q9H4F1 302 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 MINDY3Q9H8M7 445 aa17.23■□□□□ 0.35
SFSWAP-206ENST00000537582 TBX20Q9UMR3 447 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms