RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 SLC7A3Q8WY07 619 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 ZNF668Q96K58 619 aaPredicted RBP20.04■□□□□ 0.8
CCDC61-201ENST00000536603 OSMRQ99650 979 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 JPH2Q9BR39 696 aaPredicted RBP20.04■□□□□ 0.8
CCDC61-201ENST00000536603 RAB34Q9BZG1 259 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 PPME1Q9Y570 386 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 BRWD1Q9NSI6 2320 aa20.04■□□□□ 0.8
CCDC61-201ENST00000536603 RPA1P27694 616 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 CRYBB1P53674 252 aaPredicted RBP20.03■□□□□ 0.8
CCDC61-201ENST00000536603 POLGP54098 1239 aaPredicted RBP20.03■□□□□ 0.8
CCDC61-201ENST00000536603 FAM173BQ6P4H8 233 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 EXOC8Q8IYI6 725 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 TMEM40Q8WWA1 233 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 DHX33Q9H6R0 707 aaKnown RBP20.03■□□□□ 0.8
CCDC61-201ENST00000536603 BMP2KQ9NSY1 1161 aaPredicted RBP20.03■□□□□ 0.8
CCDC61-201ENST00000536603 ANKEF1Q9NU02 776 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 SUCLA2Q9P2R7 463 aaPredicted RBP20.03■□□□□ 0.8
CCDC61-201ENST00000536603 PADI3Q9ULW8 664 aa20.03■□□□□ 0.8
CCDC61-201ENST00000536603 RPS6KA5O75582 802 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 CSPG5O95196 566 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 XRCC6P12956 609 aaKnown RBP eCLIP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 CCT6AP40227 531 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 RFC5P40937 340 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 NFX1Q12986 1120 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 PAK2Q13177 524 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 SF3A1Q15459 793 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 HAUS3Q68CZ6 603 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 CCDC43Q96MW1 224 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 NACC1Q96RE7 527 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 ADAMTS10Q9H324 1103 aa20.02■□□□□ 0.8
CCDC61-201ENST00000536603 NOC2LQ9Y3T9 749 aaKnown RBP20.02■□□□□ 0.8
CCDC61-201ENST00000536603 LOXHD1Q8IVV2 1947 aa20.02■□□□□ 0.79
CCDC61-201ENST00000536603 COL4A6Q14031 1691 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 VWA3AA6NCI4 1184 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 PP2D1A8MPX8 630 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 DCXO43602 365 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 NCK2O43639 380 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 CDC25AP30304 524 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 RARRES1P49788 294 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 GPC3P51654 580 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
CCDC61-201ENST00000536603 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 RHPN2Q8IUC4 686 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 ZNF710Q8N1W2 664 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 SCLT1Q96NL6 688 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 C11orf84Q9BUA3 381 aaPredicted RBP20.01■□□□□ 0.79
CCDC61-201ENST00000536603 ZSCAN16Q9H4T2 348 aaPredicted RBP20.01■□□□□ 0.79
CCDC61-201ENST00000536603 PRKAG3Q9UGI9 489 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 RWDD3Q9Y3V2 267 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 STK24Q9Y6E0 443 aa20.01■□□□□ 0.79
CCDC61-201ENST00000536603 ENPP3O14638 875 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 BMP15O95972 392 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 RB1P06400 928 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 CDC42EP1Q00587 391 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 EMC2Q15006 297 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 CLUL1Q15846 466 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 ECM1Q16610 540 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 KRT79Q5XKE5 535 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 ALYREFQ86V81 257 aaKnown RBP20■□□□□ 0.79
CCDC61-201ENST00000536603 SNX29Q8TEQ0 813 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 NLRP7Q8WX94 980 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 ST3GAL5Q9UNP4 418 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 CLIC4Q9Y696 253 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 ADGRA3Q8IWK6 1321 aa20■□□□□ 0.79
CCDC61-201ENST00000536603 GPR182O15218 404 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 MUTP22033 750 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 DDIT3P35638 169 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 BMPR1AP36894 532 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 BTG3Q14201 252 aaPredicted RBP19.99■□□□□ 0.79
CCDC61-201ENST00000536603 FOXD4L5Q5VV16 416 aaPredicted RBP19.99■□□□□ 0.79
CCDC61-201ENST00000536603 FAM228AQ86W67 206 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 KSR1Q8IVT5 923 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 FOXD4L4Q8WXT5 416 aaPredicted RBP19.99■□□□□ 0.79
CCDC61-201ENST00000536603 MTRQ99707 1265 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 FTHL17Q9BXU8 183 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 LMAN2LQ9H0V9 348 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 TMX1Q9H3N1 280 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 IGFLR1Q9H665 355 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 ERVK-5Q9HDB9 667 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 XPNPEP1Q9NQW7 623 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
CCDC61-201ENST00000536603 KIAA1024Q9UPX6 916 aa19.99■□□□□ 0.79
CCDC61-201ENST00000536603 A0A087WZ62 844 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 C5orf67F2Z3F1 127 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 GRM6O15303 877 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 DGAT1O75907 488 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 PDIA4P13667 645 aaKnown RBP19.98■□□□□ 0.79
CCDC61-201ENST00000536603 EIF4BP23588 611 aaKnown RBP19.98■□□□□ 0.79
CCDC61-201ENST00000536603 CEBPZQ03701 1054 aaKnown RBP19.98■□□□□ 0.79
CCDC61-201ENST00000536603 ZP2Q05996 745 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 ODR4Q5SWX8 454 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 RTN4RL1Q86UN2 441 aaPredicted RBP19.98■□□□□ 0.79
CCDC61-201ENST00000536603 ADHFE1Q8IWW8 467 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 TCP11Q8WWU5 503 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 PRPF31Q8WWY3 499 aaKnown RBP19.98■□□□□ 0.79
CCDC61-201ENST00000536603 NLRP4Q96MN2 994 aa19.98■□□□□ 0.79
CCDC61-201ENST00000536603 FDXACB1Q9BRP7 624 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms