RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MYH4Q9Y623 1939 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CTAGE9A4FU28 777 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 TRPA1O75762 1119 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 EYA4O95677 639 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CALCAP01258 141 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 NR3C1P04150 777 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 SLC9A1P19634 815 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 GJA5P36382 358 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 GJC1P36383 396 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 PSMC5P62195 406 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CCNA1P78396 465 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 PPATQ06203 517 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 EP400NLQ6ZTU2 488 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 SESTD1Q86VW0 696 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 DHTKD1Q96HY7 919 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 JPH2Q9BR39 696 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CAPN7Q9Y6W3 813 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 NID2Q14112 1375 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 MYH8P13535 1937 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 GOLGA6L7A0A1B0GV03 622 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 NDUFAB1O14561 156 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 NT5C2P49902 561 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 KNOP1Q1ED39 458 aaKnown RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CCDC122Q5T0U0 273 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 STXBP4Q6ZWJ1 553 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 RPAINQ86UA6 219 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 FAM76AQ8TAV0 307 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 FNBP1Q96RU3 617 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 DUSP9Q99956 384 aaKnown RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 POLR3FQ9H1D9 316 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CUEDC2Q9H467 287 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 FAM204AQ9H8W3 233 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 TBC1D22BQ9NU19 505 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 VAV3Q9UKW4 847 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 RPL13P26373 211 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ALDH5A1P51649 535 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 BEX3Q00994 111 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 STRN3Q13033 797 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 MB21D1Q8N884 522 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 RNF149Q8NC42 400 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 LRRN4CLQ8ND94 238 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 AFG1LQ8WV93 481 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 MPHOSPH6Q99547 160 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 IMPACTQ9P2X3 320 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PRRC2BQ5JSZ5 2229 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ARAP2Q8WZ64 1704 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 TNS1Q9HBL0 1735 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 TBC1D8O95759 1140 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 SF3A3Q12874 501 aaKnown RBP eCLIP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PRPF4BQ13523 1007 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 TTI2Q6NXR4 508 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 SYT2Q8N9I0 419 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 TTC16Q8NEE8 873 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 DNAJC19Q96DA6 116 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ZBTB45Q96K62 511 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 TOPORSQ9NS56 1045 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 KIAA1522Q9P206 1035 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ADAMTS1Q9UHI8 967 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PNMA3Q9UL41 463 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 GOLGA6L10A6NI86 522 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 K7ERI5 159 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 EPHB6O15197 1021 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 GFPT2O94808 682 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 CTSHP09668 335 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 C6orf222P0C671 652 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 CXCR5P32302 372 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 RARRES1P49788 294 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 DRP2Q13474 957 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 Q4G0T1 1027 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 EPC2Q52LR7 807 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PCNX4Q63HM2 1172 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 SCARA5Q6ZMJ2 495 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 ZNF513Q8N8E2 541 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-207ENST00000536513 GCNT4Q9P109 453 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 AGTPBP1Q9UPW5 1226 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 PPP2R2CQ9Y2T4 447 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 MYO7AQ13402 2215 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 LTBP3Q9NS15 1303 aa8.94□□□□□ -0.98
ABCA4-207ENST00000536513 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 SPDYE5A6NIY4 337 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 AKAP3O75969 853 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 ABL1P00519 1130 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 VTNP04004 478 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 GYPCP04921 128 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 CCDC172P0C7W6 258 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 CETPP11597 493 aa8.93□□□□□ -0.98
ABCA4-207ENST00000536513 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms