RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 COL6A1P12109 1028 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 CTSKP43235 329 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 ID4P47928 161 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 PURAQ00577 322 aaKnown RBP5.14□□□□□ -1.59
YBX3-205ENST00000536107 RAD51AP2Q09MP3 1159 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 PPIL2Q13356 520 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 TNFAIP1Q13829 316 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 SMN1Q16637 294 aaKnown RBP5.14□□□□□ -1.59
YBX3-205ENST00000536107 BICRALQ6AI39 1079 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 MORC1Q86VD1 984 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 SMCR8Q8TEV9 937 aaPredicted RBP5.14□□□□□ -1.59
YBX3-205ENST00000536107 ALG3Q92685 438 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 NOX5Q96PH1 765 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 SIN3AQ96ST3 1273 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 PODXL2Q9NZ53 605 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 POLR3KQ9Y2Y1 108 aaPredicted RBP5.14□□□□□ -1.59
YBX3-205ENST00000536107 ZNF536O15090 1300 aa5.14□□□□□ -1.59
YBX3-205ENST00000536107 ZSWIM8A7E2V4 1837 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 ZDBF2Q9HCK1 2354 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 ERC2O15083 957 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 GNA15P30679 374 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 CFAP100Q494V2 611 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 HSP90AB3PQ58FF7 597 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 BORAQ6PGQ7 559 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 LIMS2Q7Z4I7 341 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 NLRP10Q86W26 655 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
YBX3-205ENST00000536107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.13□□□□□ -1.59
YBX3-205ENST00000536107 CPA5Q8WXQ8 436 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 HERVK_113Q902F9 699 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 RTF1Q92541 710 aaKnown RBP5.13□□□□□ -1.59
YBX3-205ENST00000536107 ZKSCAN4Q969J2 545 aaPredicted RBP5.13□□□□□ -1.59
YBX3-205ENST00000536107 ZBED3Q96IU2 234 aaPredicted RBP5.13□□□□□ -1.59
YBX3-205ENST00000536107 WRNIP1Q96S55 665 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 PCDHAC2Q9Y5I4 1007 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 TAF1P21675 1872 aa5.13□□□□□ -1.59
YBX3-205ENST00000536107 BAHCC1Q9P281 2608 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 CACNA1BQ00975 2339 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 KIF20BQ96Q89 1820 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 TCP10L2B9ZVM9 353 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 CORO7P57737 925 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 ICAM4Q14773 271 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 RTP2Q5QGT7 225 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 FAM26FQ5R3K3 315 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 FAM124AQ86V42 546 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 JAMLQ86YT9 394 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 SMARCC2Q8TAQ2 1214 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 ZBTB8AQ96BR9 441 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 PRMT6Q96LA8 375 aaPredicted RBP5.12□□□□□ -1.59
YBX3-205ENST00000536107 NOC4LQ9BVI4 516 aaKnown RBP5.12□□□□□ -1.59
YBX3-205ENST00000536107 CD248Q9HCU0 757 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 MSRAQ9UJ68 235 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 DBR1Q9UK59 544 aaKnown RBP5.12□□□□□ -1.59
YBX3-205ENST00000536107 COG5Q9UP83 839 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 XDHP47989 1333 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 CFAP54Q96N23 3096 aa5.12□□□□□ -1.59
YBX3-205ENST00000536107 UBR2Q8IWV8 1755 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 XIRP2A4UGR9 3374 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 GRXCR1A8MXD5 290 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 MEIS1O00470 390 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 F13A1P00488 732 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 RAG1P15918 1043 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 CYP2B6P20813 491 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 PMLP29590 882 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 LMNB2Q03252 620 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 PPATQ06203 517 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 ACAP1Q15027 740 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 SF3B3Q15393 1217 aaKnown RBP5.11□□□□□ -1.59
YBX3-205ENST00000536107 ANKRD13CQ8N6S4 541 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 LINC00482Q8N8I6 264 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 ANKS1AQ92625 1134 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 FAM89AQ96GI7 184 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 THUMPD2Q9BTF0 503 aaKnown RBP5.11□□□□□ -1.59
YBX3-205ENST00000536107 TMEM39BQ9GZU3 492 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 COA1Q9GZY4 146 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 SLC28A3Q9HAS3 691 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 FAM86C1Q9NVL1 165 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 MIS18AQ9NYP9 233 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 PRR13Q9NZ81 148 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 AK5Q9Y6K8 562 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 ALPK3Q96L96 1907 aa5.11□□□□□ -1.59
YBX3-205ENST00000536107 MROH6A6NGR9 719 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 U2SURPO15042 1029 aaKnown RBP5.1□□□□□ -1.59
YBX3-205ENST00000536107 DCXO43602 365 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 SMARCA5O60264 1052 aaPredicted RBP5.1□□□□□ -1.59
YBX3-205ENST00000536107 EPHB4P54760 987 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 FPGSQ05932 587 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 CACNB2Q08289 660 aaPredicted RBP5.1□□□□□ -1.59
YBX3-205ENST00000536107 AIMP1Q12904 312 aaKnown RBP5.1□□□□□ -1.59
YBX3-205ENST00000536107 CAMK2GQ13555 558 aaPredicted RBP5.1□□□□□ -1.59
YBX3-205ENST00000536107 SURF1Q15526 300 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 TRIM60Q495X7 471 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 ARSHQ5FYA8 562 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 GADL1Q6ZQY3 521 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 MCM10Q7L590 875 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 NAT16Q8N8M0 369 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 DNERQ8NFT8 737 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 PCSK5Q92824 1860 aa5.1□□□□□ -1.59
YBX3-205ENST00000536107 ATOH1Q92858 354 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms