RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 HAS1Q92839 578 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 TNFRSF25Q93038 417 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 CEP170P1Q96L14 293 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 NLRP4Q96MN2 994 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 JPH2Q9BR39 696 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 FDXACB1Q9BRP7 624 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 LXNQ9BS40 222 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 SUCLA2Q9P2R7 463 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 WRAP73Q9P2S5 460 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 PCDHB12Q9Y5F1 795 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 BRWD1Q9NSI6 2320 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 MYO7AQ13402 2215 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 BTBD18B2RXH4 712 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 HOXA2O43364 376 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 NCK2O43639 380 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 KIF20AO95235 890 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 LAG3P18627 525 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 YWHABP31946 246 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 IRS1P35568 1242 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 POLGP54098 1239 aaPredicted RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CDC42EP1Q00587 391 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 GUCY1B3Q02153 619 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CYP4A11Q02928 519 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CCDC173Q0VFZ6 552 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CAMK1Q14012 370 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CTTNQ14247 550 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CLUL1Q15846 466 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CALCRLQ16602 461 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 SKOR2Q2VWA4 1001 aaPredicted RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 PUS10Q3MIT2 529 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 ADGRD2Q7Z7M1 963 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 ZNF410Q86VK4 478 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 KSR1Q8IVT5 923 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CCDC83Q8IWF9 413 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 COLGALT1Q8NBJ5 622 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 SLC7A3Q8WY07 619 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 PPP2R3CQ969Q6 453 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 DYDC2Q96IM9 177 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CASD1Q96PB1 797 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 PPP1R9BQ96SB3 815 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 TMEM117Q9H0C3 514 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 CWH43Q9H720 699 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 GRPEL1Q9HAV7 217 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 RNF19AQ9NV58 838 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 TYW1Q9NV66 732 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 DACT1Q9NYF0 836 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 RGL1Q9NZL6 768 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 PCDHGC5Q9Y5F6 944 aa9.55□□□□□ -0.88
SFSWAP-202ENST00000535202 GRXCR2A6NFK2 248 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 WNT7AO00755 349 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 DYNC1I1O14576 645 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 LINC01565O15544 149 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 NEMFO60524 1076 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TBX10O75333 385 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 FGF18O76093 207 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 LTBRP36941 435 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 NDUFV1P49821 464 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 DLX2Q07687 328 aaPredicted RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 DMTNQ08495 405 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 SPIRE1Q08AE8 756 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 COL19A1Q14993 1142 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 XKR9Q5GH70 373 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 CLLU1OSQ5K130 101 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TWF2Q6IBS0 349 aaKnown RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 OTUD6AQ7L8S5 288 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 CATSPER4Q7RTX7 472 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 RBM23Q86U06 439 aaKnown RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TPH2Q8IWU9 490 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 C4orf19Q8IY42 314 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 LRRC43Q8N309 656 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 ZNF579Q8NAF0 562 aaKnown RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 HELQQ8TDG4 1101 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 MICAL1Q8TDZ2 1067 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TMEM143Q96AN5 459 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 INO80BQ9C086 356 aaPredicted RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TLR9Q9NR96 1032 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 PIN4Q9Y237 131 aaKnown RBP9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM50BQ9Y247 325 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 COL4A3BPQ9Y5P4 624 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 XIRP2A4UGR9 3374 aa9.54□□□□□ -0.88
SFSWAP-202ENST00000535202 TTC28Q96AY4 2481 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 A0A0U1RQF3 1178 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 ZBTB39O15060 712 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 PBX3P40426 434 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 RFC5P40937 340 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 TXKP42681 527 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 NRIP1P48552 1158 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 UBE3AQ05086 875 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 EMC2Q15006 297 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms