RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 IFT122Q9HBG6 1241 aa22.79■■□□□ 1.24
CHFR-209ENST00000535181 ERVK-5Q9HDB9 667 aa22.79■■□□□ 1.24
CHFR-209ENST00000535181 GLRA2P23416 452 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 CAPSQ13938 189 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 NAALADL2Q58DX5 795 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 FAM102BQ5T8I3 360 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 SRGAP1Q7Z6B7 1085 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 GPRC5CQ9NQ84 441 aa22.78■■□□□ 1.24
CHFR-209ENST00000535181 CXXC1Q9P0U4 656 aaPredicted RBP22.78■■□□□ 1.24
CHFR-209ENST00000535181 A0A087X0B3 334 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 PTENP60484 403 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 PCBP1Q15365 356 aaKnown RBP eCLIP22.77■■□□□ 1.24
CHFR-209ENST00000535181 RNF149Q8NC42 400 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 PHOSPHO2Q8TCD6 241 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 DRC1Q96MC2 740 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 C17orf75Q9HAS0 396 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 FAM13BQ9NYF5 915 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 ST3GAL5Q9UNP4 418 aa22.77■■□□□ 1.24
CHFR-209ENST00000535181 LAMA3Q16787 3333 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 SSBP05455 408 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHFR-209ENST00000535181 SRGAP2CP0DJJ0 459 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 SFPQP23246 707 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHFR-209ENST00000535181 STAT6P42226 847 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 NAMPTP43490 491 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 PHKA2P46019 1235 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 WDR5P61964 334 aaKnown RBP22.76■■□□□ 1.23
CHFR-209ENST00000535181 PPP2R5AQ15172 486 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 MAEAQ7L5Y9 396 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 DAW1Q8N136 415 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 ZNF668Q96K58 619 aaPredicted RBP22.76■■□□□ 1.23
CHFR-209ENST00000535181 SLC9A7Q96T83 725 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 PYM1Q9BRP8 204 aaKnown RBP22.76■■□□□ 1.23
CHFR-209ENST00000535181 CUEDC2Q9H467 287 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 SLC4A7Q9Y6M7 1214 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 TRIOBPQ9H2D6 2365 aa22.76■■□□□ 1.23
CHFR-209ENST00000535181 ZBBXA8MT70 800 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 CMA1P23946 247 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 KCNJ6P48051 423 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 MAPK7Q13164 816 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 MCM6Q14566 821 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 E2F4Q16254 413 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 ARSHQ5FYA8 562 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 CDCA2Q69YH5 1023 aaPredicted RBP22.75■■□□□ 1.23
CHFR-209ENST00000535181 GPBP1Q86WP2 473 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 TMX1Q9H3N1 280 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 ODF2LQ9ULJ1 636 aa22.75■■□□□ 1.23
CHFR-209ENST00000535181 FAM237AA0A1B0GTK4 181 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 A0A1W2PQ27 194 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 A0A1W2PQ64 194 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 A0A1W2PQD8 194 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 HIP1RO75146 1068 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 NFX1Q12986 1120 aaKnown RBP22.74■■□□□ 1.23
CHFR-209ENST00000535181 IQUBQ8NA54 791 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 BSNDQ8WZ55 320 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 IFT74Q96LB3 600 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 TSPYL2Q9H2G4 693 aaPredicted RBP22.74■■□□□ 1.23
CHFR-209ENST00000535181 KCNG1Q9UIX4 513 aa22.74■■□□□ 1.23
CHFR-209ENST00000535181 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.73■■□□□ 1.23
CHFR-209ENST00000535181 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.73■■□□□ 1.23
CHFR-209ENST00000535181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.73■■□□□ 1.23
CHFR-209ENST00000535181 AMHP03971 560 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 HABP4Q5JVS0 413 aaKnown RBP22.73■■□□□ 1.23
CHFR-209ENST00000535181 SV2BQ7L1I2 683 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 PDILTQ8N807 584 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 LINC01599Q8WXQ3 324 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 C2orf40Q9H1Z8 148 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 MAGEF1Q9HAY2 307 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 CHST12Q9NRB3 414 aa22.73■■□□□ 1.23
CHFR-209ENST00000535181 PTPRSQ13332 1948 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 LRRIQ4A6NIV6 560 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 ENPP3O14638 875 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 ATP2A2P16615 1042 aaKnown RBP22.72■■□□□ 1.23
CHFR-209ENST00000535181 SMAD3P84022 425 aaKnown RBP22.72■■□□□ 1.23
CHFR-209ENST00000535181 MBTD1Q05BQ5 628 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 DSC3Q14574 896 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 REEP2Q9BRK0 252 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 PANK2Q9BZ23 570 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 TNMDQ9H2S6 317 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 MINDY3Q9H8M7 445 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 GDPD2Q9HCC8 539 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 C1orf112Q9NSG2 853 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 KCNH3Q9ULD8 1083 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 HPSEQ9Y251 543 aa22.72■■□□□ 1.23
CHFR-209ENST00000535181 ZNF131P52739 623 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 DEFB103AP81534 67 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 DMP1Q13316 513 aaPredicted RBP22.71■■□□□ 1.23
CHFR-209ENST00000535181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHFR-209ENST00000535181 CATSPER4Q7RTX7 472 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 RTN4RL1Q86UN2 441 aaPredicted RBP22.71■■□□□ 1.23
CHFR-209ENST00000535181 ZBTB8OSQ8IWT0 167 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 NTPCRQ9BSD7 190 aaKnown RBP22.71■■□□□ 1.23
CHFR-209ENST00000535181 RGS18Q9NS28 235 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 AGPAT5Q9NUQ2 364 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 KBTBD4Q9NVX7 518 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 PHLPP2Q6ZVD8 1323 aa22.71■■□□□ 1.23
CHFR-209ENST00000535181 MYH11P35749 1972 aa22.7■■□□□ 1.23
CHFR-209ENST00000535181 TTC3P53804 2025 aa22.7■■□□□ 1.23
CHFR-209ENST00000535181 LAMA2P24043 3122 aaKnown RBP22.7■■□□□ 1.22
CHFR-209ENST00000535181 POLR2DO15514 142 aaKnown RBP22.7■■□□□ 1.22
CHFR-209ENST00000535181 MGEA5O60502 916 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms