RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 AQP7O14520 342 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 MARCH6O60337 910 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 KPNA6O60684 536 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 CEACAM5P06731 702 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 ADRB1P08588 477 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 GSTM1P09488 218 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 JMJD7P0C870 316 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 LCP1P13796 627 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 HOXD10P28358 340 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 NF2P35240 595 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 LTBRP36941 435 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 PSMC4P43686 418 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 SEPHS1P49903 392 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 NEK4P51957 841 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 GPR85P60893 370 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 FAM50AQ14320 339 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 CDCA2Q69YH5 1023 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 DDX46Q7L014 1031 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 ARMC9Q7Z3E5 817 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 AHI1Q8N157 1196 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 HERVK_113Q902F9 699 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 ZFYVE21Q9BQ24 234 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 GPR27Q9NS67 375 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 TCFL5Q9UL49 500 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 SRPK3Q9UPE1 567 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 WASHC2AQ641Q2 1341 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 KMT2EQ8IZD2 1858 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 FAM181BA6NEQ2 426 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 FGF10O15520 208 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 NPTXRO95502 500 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 IGLV1-40P01703 118 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 PCBP3P57721 371 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 PRKCZQ05513 592 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 INF2Q27J81 1249 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 BRDTQ58F21 947 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 E4F1Q66K89 784 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 MBLAC2Q68D91 279 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 ZCCHC8Q6NZY4 707 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 ZPBP2Q6X784 338 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 LHFPL2Q6ZUX7 228 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 THAP5Q7Z6K1 395 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 FERMT3Q86UX7 667 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 SP8Q8IXZ3 490 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 IFNL3Q8IZI9 196 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 PLD6Q8N2A8 252 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 RCBTB1Q8NDN9 531 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 CLMNQ96JQ2 1002 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 METTL22Q9BUU2 404 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 OSBPL1AQ9BXW6 950 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 LRRC4CQ9HCJ2 640 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 MCM8Q9UJA3 840 aa5.91□□□□□ -1.46
ECHDC1-223ENST00000534442 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 TMEM82A0PJX8 343 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 KLRG2A4D1S0 409 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 YDJCA8MPS7 323 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ARVCFO00192 962 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 PSMD14O00487 310 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ESR1P03372 595 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 FSTP19883 344 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 HOXC9P31274 260 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 NBL1P41271 181 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 CLCN7P51798 805 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 STRN3Q13033 797 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 KCNAB2Q13303 367 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 DHCR24Q15392 516 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 CFAP100Q494V2 611 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 LBX2Q6XYB7 198 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 KIAA2013Q8IYS2 634 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ATL2Q8NHH9 583 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 PCDH19Q8TAB3 1148 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 DIO2Q92813 273 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 NKD2Q969F2 451 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 MMP19Q99542 508 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ANGEL1Q9UNK9 670 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ZBTB1Q9Y2K1 713 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 ZNF281Q9Y2X9 895 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 PCDHA11Q9Y5I1 949 aa5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 CNOT1A5YKK6 2376 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-223ENST00000534442 AOX1Q06278 1338 aa5.9□□□□□ -1.47
ECHDC1-223ENST00000534442 MAST2Q6P0Q8 1798 aa5.9□□□□□ -1.47
ECHDC1-223ENST00000534442 B4E1Z4 1266 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 TCERG1O14776 1098 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 TLR2O60603 784 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 GLRX3O76003 335 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 PARNO95453 639 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 CKMP06732 381 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 H2AFB1P0C5Y9 115 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms