RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	ZSCAN22	P10073	491 aa	Predicted RBP	7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	EXOSC9	Q06265	439 aa	Known RBP	7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	MAP3K21	Q5TCX8	1036 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	FBXW10	Q5XX13	1052 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	CILP2	Q8IUL8	1156 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	SIAH1	Q8IUQ4	282 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	ZFPM1	Q8IX07	1006 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	TMEM192	Q8IY95	271 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	RNF34	Q969K3	372 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	SLC9A7	Q96T83	725 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	G6PC3	Q9BUM1	346 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	CD320	Q9NPF0	282 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	OGDHL	Q9ULD0	1010 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	GAK	O14976	1311 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	PFAS	O15067	1338 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	RPTOR	Q8N122	1335 aa		7.52	□□□□□ -1.21
PICALM-223	ENST00000534412	CACNA1F	O60840	1977 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	MGAM	O43451	1857 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	NRDC	O43847	1150 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	CTNND1	O60716	968 aa	Known RBP	7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	COL6A1	P12109	1028 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	RGS3	P49796	1198 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	AUH	Q13825	339 aa	Known RBP	7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	TREML2	Q5T2D2	321 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	ADGRF1	Q5T601	910 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	GADL1	Q6ZQY3	521 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	WDR63	Q8IWG1	891 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	ANKRD13C	Q8N6S4	541 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	LPIN2	Q92539	896 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	DSCC1	Q9BVC3	393 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	C11orf49	Q9H6J7	331 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	ZNF552	Q9H707	407 aa	Predicted RBP	7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	USP40	Q9NVE5	1235 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	GFOD1	Q9NXC2	390 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	GJD2	Q9UKL4	321 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	DNAH12	Q6ZR08	3092 aa		7.51	□□□□□ -1.21
PICALM-223	ENST00000534412	TMEM82	A0PJX8	343 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	FAM86C2P	A6NEL3	165 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	TRIM75P	A6NK02	468 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	NUAK1	O60285	661 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	SYN1	P17600	705 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	RFX5	P48382	616 aa	Predicted RBP	7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	GCLC	P48506	637 aa	Predicted RBP	7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	GALK1	P51570	392 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	RTP1	P59025	263 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	FANCC	Q00597	558 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	BBS9	Q3SYG4	887 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	SLC4A10	Q6U841	1118 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	NLRX1	Q86UT6	975 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	CCDC144CP	Q8IYA2	1237 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	KLHDC4	Q8TBB5	520 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	TRIB2	Q92519	343 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	FCRL2	Q96LA5	508 aa	Predicted RBP	7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	GUCD1	Q96NT3	240 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	CDADC1	Q9BWV3	514 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	CRTAC1	Q9NQ79	661 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	PRR13	Q9NZ81	148 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	TNFRSF10D	Q9UBN6	386 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	SUCO	Q9UBS9	1254 aa	Known RBP	7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	DOCK2	Q92608	1830 aa		7.5	□□□□□ -1.21
PICALM-223	ENST00000534412	DDX60L	Q5H9U9	1706 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	DOCK1	Q14185	1865 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	LOC285556	D6RIA3	1793 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	PTPRF	P10586	1907 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	DDTL	A6NHG4	134 aa	Predicted RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	EYA2	O00167	538 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	SLC5A1	P13866	664 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	ZEB1	P37275	1124 aa	Predicted RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	LINC00310	P59036	64 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	DLG4	P78352	724 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	ZNF394	Q53GI3	561 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	CWF19L1	Q69YN2	538 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	GALNT18	Q6P9A2	607 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	C1QL4	Q86Z23	238 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	TM9SF2	Q99805	663 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	DDX4	Q9NQI0	724 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	MORF4L1	Q9UBU8	362 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	PCDHGB7	Q9Y5F8	929 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	LRRFIP2	Q9Y608	721 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	TAF6L	Q9Y6J9	622 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	PHIP	Q8WWQ0	1821 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	PDS5A	Q29RF7	1337 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	TTC28	Q96AY4	2481 aa		7.49	□□□□□ -1.21
PICALM-223	ENST00000534412	TEX51	A0A1B0GUA7	166 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	ARL4A	P40617	200 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	CCDC184	Q52MB2	194 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	OLFML2B	Q68BL8	750 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	ZPBP2	Q6X784	338 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	ATG9A	Q7Z3C6	839 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	SOCS4	Q8WXH5	440 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	DENND2A	Q9ULE3	1009 aa		7.48	□□□□□ -1.21
PICALM-223	ENST00000534412	MYOCOS	A0A1B0GUC4	107 aa		7.47	□□□□□ -1.21
PICALM-223	ENST00000534412	NOTO	A8MTQ0	251 aa		7.47	□□□□□ -1.21
PICALM-223	ENST00000534412	CIAO1	O76071	339 aa		7.47	□□□□□ -1.21
PICALM-223	ENST00000534412	GSN	P06396	782 aa		7.47	□□□□□ -1.21
PICALM-223	ENST00000534412	PMS1	P54277	932 aa	Known RBP	7.47	□□□□□ -1.21

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