RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 SART1O43290 800 aaKnown RBP20.72■□□□□ 0.91
SMPD1-210ENST00000534405 HIP1RO75146 1068 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 PCK1P35558 622 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 SCNN1DP51172 638 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 KLC1Q07866 573 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 MAN2A1Q16706 1144 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 TMEM154Q6P9G4 183 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 KCTD1Q719H9 257 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 ASRGL1Q7L266 308 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 PBKQ96KB5 322 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 ELAC2Q9BQ52 826 aaKnown RBP20.72■□□□□ 0.91
SMPD1-210ENST00000534405 CCDC134Q9H6E4 229 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 MMRN2Q9H8L6 949 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 GOPCQ9HD26 462 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 DDX25Q9UHL0 483 aaKnown RBP20.72■□□□□ 0.91
SMPD1-210ENST00000534405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMPD1-210ENST00000534405 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
SMPD1-210ENST00000534405 MMEP08473 750 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 TNNC1P63316 161 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 DNAJC19Q96DA6 116 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 FGFBP2Q9BYJ0 223 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 RAB34Q9BZG1 259 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 USP40Q9NVE5 1235 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 CD151P48509 253 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 SCNN1BP51168 640 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 SFSWAPQ12872 951 aaKnown RBP20.71■□□□□ 0.91
SMPD1-210ENST00000534405 OR52E8Q6IFG1 317 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
SMPD1-210ENST00000534405 RPS6KC1Q96S38 1066 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 SALL4Q9UJQ4 1053 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 FBXL5Q9UKA1 691 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC53A6NM62 1247 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 ACADSP16219 412 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 GBP1P32455 592 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 POLE2P56282 527 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC63Q05C16 580 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 PLS1Q14651 629 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 KRT71Q3SY84 523 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 RNF10Q8N5U6 811 aaKnown RBP20.7■□□□□ 0.91
SMPD1-210ENST00000534405 UBLCP1Q8WVY7 318 aaPredicted RBP20.7■□□□□ 0.91
SMPD1-210ENST00000534405 BAP1Q92560 729 aa20.7■□□□□ 0.91
SMPD1-210ENST00000534405 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-210ENST00000534405 CHN1P15882 459 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
SMPD1-210ENST00000534405 KIF11P52732 1056 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 LMNB2Q03252 620 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 PPP1R18Q6NYC8 613 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 NOX5Q96PH1 765 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 NSRP1Q9H0G5 558 aaKnown RBP20.7■□□□□ 0.9
SMPD1-210ENST00000534405 VCXQ9H320 206 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 TMEM59LQ9UK28 342 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 STK38LQ9Y2H1 464 aa20.7■□□□□ 0.9
SMPD1-210ENST00000534405 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 OAS1P00973 400 aaKnown RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 PENKP01210 267 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 PDHA1P08559 390 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 COASYQ13057 564 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 DBN1Q16643 649 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 SHROOM1Q2M3G4 852 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 RNF220Q5VTB9 566 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 RRAGAQ7L523 313 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 SESTD1Q86VW0 696 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 FBF1Q8TES7 1133 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 COA1Q9GZY4 146 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 DMAP1Q9NPF5 467 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-210ENST00000534405 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 NFIAQ12857 509 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 DOK7Q18PE1 504 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 ZCWPW2Q504Y3 356 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 CHADLQ6NUI6 762 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 CDC42EP5Q6NZY7 148 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 ZFPM1Q8IX07 1006 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 KIF2BQ8N4N8 673 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 MTMR8Q96EF0 704 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 FGD4Q96M96 766 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 ABCB11O95342 1321 aa20.69■□□□□ 0.9
SMPD1-210ENST00000534405 ZBTB5O15062 677 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 KCNMA1Q12791 1236 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 ATXN10Q9UBB4 475 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 ARFGEF1Q9Y6D6 1849 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L15C9J2P7 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L13C9JLJ4 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L11C9JVI0 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L18D6R9N7 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L22D6RA61 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L17D6RBQ6 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L19D6RCP7 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L20D6RJB6 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 E9PMD0 336 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 CALB2P22676 271 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 RFC5P40937 340 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 MMP13P45452 471 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L24Q0WX57 530 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 USP17L6PQ6QN14 398 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 TRIM42Q8IWZ5 723 aa20.68■□□□□ 0.9
SMPD1-210ENST00000534405 OPTNQ96CV9 577 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms