RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 NAALADL2Q58DX5 795 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 EIF2AK1Q9BQI3 630 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 JPH2Q9BR39 696 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 GCOM2Q9BZD3 368 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 NSUN3Q9H649 340 aaKnown RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-215ENST00000534307 PLXNA4Q9HCM2 1894 aa15.73■□□□□ 0.11
SF3B2-215ENST00000534307 TBKBP1A7MCY6 615 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ZBTB39O15060 712 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ITGB1P05556 798 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ATF7P17544 494 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 DNAJB1P25685 340 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 RFC5P40937 340 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 CYP4A11Q02928 519 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 CTTNQ14247 550 aaKnown RBP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 RABEP1Q15276 862 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 SAFBQ15424 915 aaKnown RBP eCLIP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 LEXMQ3ZCV2 418 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ECHDC2Q86YB7 292 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 KSR1Q8IVT5 923 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 SLC7A3Q8WY07 619 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 FBXL18Q96ME1 805 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 IFT122Q9HBG6 1241 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 ALG13Q9NP73 1137 aaKnown RBP15.72■□□□□ 0.11
SF3B2-215ENST00000534307 HCSTQ9UBK5 93 aa15.72■□□□□ 0.11
SF3B2-215ENST00000534307 A0A0U1RQF3 1178 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-215ENST00000534307 IBSPP21815 317 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-215ENST00000534307 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-215ENST00000534307 EXOC8Q8IYI6 725 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 NEK9Q8TD19 979 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 PRPF31Q8WWY3 499 aaKnown RBP15.71■□□□□ 0.11
SF3B2-215ENST00000534307 NLRP4Q96MN2 994 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 CASD1Q96PB1 797 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 TMEM117Q9H0C3 514 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 CWH43Q9H720 699 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 XPNPEP1Q9NQW7 623 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 CHST12Q9NRB3 414 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
SF3B2-215ENST00000534307 CACNA1HO95180 2353 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 KCNA5P22460 613 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 SSTR3P32745 418 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 MCM7P33993 719 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 TXKP42681 527 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 HYAL1Q12794 435 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 ORC2Q13416 577 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 EMC2Q15006 297 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 CTC1Q2NKJ3 1217 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 OTUD6AQ7L8S5 288 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 TPH2Q8IWU9 490 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 PSPC1Q8WXF1 523 aaKnown RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 TMEM143Q96AN5 459 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 PABPC5Q96DU9 382 aaKnown RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 TYW1Q9NV66 732 aaKnown RBP15.7■□□□□ 0.1
SF3B2-215ENST00000534307 DACT1Q9NYF0 836 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 VPS13AQ96RL7 3174 aa15.7■□□□□ 0.1
SF3B2-215ENST00000534307 POTEMA6NI47 508 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 HOXA2O43364 376 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 CD2BP2O95400 341 aaKnown RBP15.69■□□□□ 0.1
SF3B2-215ENST00000534307 EOMESO95936 686 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 SPATA31C1P0DKV0 1188 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 ALADP13716 330 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 LTBRP36941 435 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 LAMTOR4Q0VGL1 99 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 XKR9Q5GH70 373 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 PTCRAQ6ISU1 281 aaPredicted RBP15.69■□□□□ 0.1
SF3B2-215ENST00000534307 COLGALT1Q8NBJ5 622 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 POF1BQ8WVV4 589 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 MINDY3Q9H8M7 445 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 ANKEF1Q9NU02 776 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 KMT2EQ8IZD2 1858 aa15.69■□□□□ 0.1
SF3B2-215ENST00000534307 DCHS1Q96JQ0 3298 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 ATP2B1P20020 1258 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 U2AF2P26368 475 aaKnown RBP eCLIP15.68■□□□□ 0.1
SF3B2-215ENST00000534307 IRS1P35568 1242 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 PHKA2P46019 1235 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 TRAPPC10P48553 1259 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 RARRES1P49788 294 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms