RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TUBGCP5Q96RT8 1024 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 MPHOSPH9Q99550 1183 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 SLC6A15Q9H2J7 730 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 KANSL2Q9H9L4 492 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 FANCLQ9NW38 375 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 USP36Q9P275 1121 aaKnown RBP5.56□□□□□ -1.52
ITGB1-219ENST00000534049 DENND2AQ9ULE3 1009 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 CTDP1Q9Y5B0 961 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-219ENST00000534049 ERICH3Q5RHP9 1530 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 F2P00734 622 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 TACR2P21452 398 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 CD40P25942 277 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 RGS3P49796 1198 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 NEK4P51957 841 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 TBR1Q16650 682 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 LRRTM3Q86VH5 581 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 NIM1KQ8IY84 436 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 OR14K1Q8NGZ2 314 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 POLR3BQ9NW08 1133 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-219ENST00000534049 PLA2G3Q9NZ20 509 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 SRRDQ9UH36 339 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 CD2APQ9Y5K6 639 aa5.55□□□□□ -1.52
ITGB1-219ENST00000534049 NCLP19338 710 aaKnown RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 ACO1P21399 889 aaKnown RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 GDF5P43026 501 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 LRRC32Q14392 662 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 MAN2A1Q16706 1144 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 SPDYAQ5MJ70 313 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 GPR158Q5T848 1215 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 CRIP3Q6Q6R5 217 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 MAMDC4Q6UXC1 1216 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 SPRED1Q7Z699 444 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 NOP9Q86U38 636 aaKnown RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 BCL6BQ8N143 479 aaPredicted RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 DYDC2Q96IM9 177 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 WDR92Q96MX6 357 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 ELF4Q99607 663 aaPredicted RBP5.54□□□□□ -1.52
ITGB1-219ENST00000534049 HAPLN2Q9GZV7 340 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 VPS11Q9H270 941 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 OXSMQ9NWU1 459 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 FHAD1B1AJZ9 1412 aa5.54□□□□□ -1.52
ITGB1-219ENST00000534049 DAPK3O43293 454 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 FZD7O75084 574 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 C6P13671 934 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 SCNN1BP51168 640 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 ADCY2Q08462 1091 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 ADAM15Q13444 863 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 RIN1Q13671 783 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 GRM7Q14831 915 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 NOLC1Q14978 699 aaKnown RBP eCLIP5.53□□□□□ -1.52
ITGB1-219ENST00000534049 KIAA1841Q6NSI8 718 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 ANKRD35Q8N283 1001 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 MFSD3Q96ES6 412 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
ITGB1-219ENST00000534049 PITHD1Q9GZP4 211 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-219ENST00000534049 A0A1W2PRX2 142 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 KPNA6O60684 536 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 ATP2A2P16615 1042 aaKnown RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 SLC9A1P19634 815 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 PTX3P26022 381 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 ACRV1P26436 265 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 ADCY7P51828 1080 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 KPNA1P52294 538 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 DSG1Q02413 1049 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 CREB3L3Q68CJ9 461 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 KIAA0907Q7Z7F0 614 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 C11orf74Q86VG3 221 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 GPR135Q8IZ08 494 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 OR2W6PQ8NHA6 318 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 NKD2Q969F2 451 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 HIST1H2AHQ96KK5 128 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 HIST1H2AJQ99878 128 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 OSBPL6Q9BZF3 934 aa5.52□□□□□ -1.53
ITGB1-219ENST00000534049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.52□□□□□ -1.53
ITGB1-219ENST00000534049 A0A0A6YYJ9 748 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 ST20-MTHFSA0A0A6YYL1 179 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 CYR61O00622 381 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 ENPP3O14638 875 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 RRP9O43818 475 aaKnown RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 PRPF6O94906 941 aaKnown RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 FSBPO95073 299 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 JUNP05412 331 aaKnown RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 FOXL1Q12952 345 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 TCIRG1Q13488 830 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 CYB5RLQ6IPT4 315 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 ESRP1Q6NXG1 681 aaKnown RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 Q6ZSN1 163 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 THEMISQ8N1K5 641 aaPredicted RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 D2HGDHQ8N465 521 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF747Q9BV97 191 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 C14orf93Q9H972 538 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms