RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 A0A0U1RQF3 1178 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 MEIS3P2A8K0S8 358 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 BACH1O14867 736 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 DHX15O43143 795 aaKnown RBP13.99□□□□□ -0.17
SVIP-205ENST00000533774 ZC3H11AO75152 810 aaKnown RBP eCLIP13.99□□□□□ -0.17
SVIP-205ENST00000533774 SMARCA1P28370 1054 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
SVIP-205ENST00000533774 CLCN4P51793 760 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 PTH1RQ03431 593 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 HDAC1Q13547 482 aaPredicted RBP13.99□□□□□ -0.17
SVIP-205ENST00000533774 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 PDXDC2PQ6P474 469 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
SVIP-205ENST00000533774 C1orf210Q8IVY1 113 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 METTL13Q8N6R0 699 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 GPR152Q8TDT2 470 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 MYADMQ96S97 322 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 LY9Q9HBG7 655 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 ZNF302Q9NR11 478 aa13.99□□□□□ -0.17
SVIP-205ENST00000533774 SEC63Q9UGP8 760 aaKnown RBP13.99□□□□□ -0.17
SVIP-205ENST00000533774 ERICH2A1L162 156 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 E7EWF7 191 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 MEIS1O00470 390 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 LILRB3O75022 631 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 GALTP07902 379 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 CNPP09543 421 aaKnown RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 RXRAP19793 462 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 POLGP54098 1239 aaPredicted RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 TRDNQ13061 729 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 CEP55Q53EZ4 464 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 TYW1BQ6NUM6 668 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 MB21D2Q8IYB1 491 aaPredicted RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 ST13P5Q8NFI4 369 aaPredicted RBP13.98□□□□□ -0.17
SVIP-205ENST00000533774 LPPQ93052 612 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 FOXQ1Q9C009 403 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
SVIP-205ENST00000533774 MYBP10242 640 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 EIF4BP23588 611 aaKnown RBP13.97□□□□□ -0.17
SVIP-205ENST00000533774 SLC11A1P49279 550 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 FAM160B1Q5W0V3 765 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 PHLDB3Q6NSJ2 640 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
SVIP-205ENST00000533774 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 LRRC71Q8N4P6 559 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 CTCFLQ8NI51 663 aaPredicted RBP13.97□□□□□ -0.17
SVIP-205ENST00000533774 TBC1D13Q9NVG8 400 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 SIT1Q9Y3P8 196 aa13.97□□□□□ -0.17
SVIP-205ENST00000533774 TDRD15B5MCY1 1934 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 DCDC2BA2VCK2 349 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 HIP1O00291 1037 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 DDAH1O94760 285 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 SSBP05455 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
SVIP-205ENST00000533774 SRFP11831 508 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 RFX1P22670 979 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 GBP2P32456 591 aaPredicted RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 GIT2Q14161 759 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 ST3GAL2Q16842 350 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 ZNF280BQ86YH2 543 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 NCOA7Q8NI08 942 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 MRPL9Q9BYD2 267 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 WDR6Q9NNW5 1121 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 EPS15L1Q9UBC2 864 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 AKT3Q9Y243 479 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 MAFBQ9Y5Q3 323 aaPredicted RBP13.96□□□□□ -0.17
SVIP-205ENST00000533774 NOTCH4Q99466 2003 aa13.96□□□□□ -0.17
SVIP-205ENST00000533774 DARSP14868 501 aaKnown RBP13.95□□□□□ -0.18
SVIP-205ENST00000533774 TGM1P22735 817 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 KLRC2P26717 231 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 KIF5BP33176 963 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 GPC3P51654 580 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 VARS2Q5ST30 1063 aaKnown RBP13.95□□□□□ -0.18
SVIP-205ENST00000533774 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
SVIP-205ENST00000533774 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 PJA1Q8NG27 643 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 ANO3Q9BYT9 981 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 ARHGEF3Q9NR81 526 aa13.95□□□□□ -0.18
SVIP-205ENST00000533774 CLUHO75153 1309 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 CNOT1A5YKK6 2376 aaKnown RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms