RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 GCOM2Q9BZD3 368 aaPredicted RBP19.31■□□□□ 0.68
NXF1-216ENST00000533499 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 CSDE1O75534 798 aaKnown RBP19.3■□□□□ 0.68
NXF1-216ENST00000533499 IQCF3P0C7M6 154 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 GHRP10912 638 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 ITGB8P26012 769 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 PHKA2P46019 1235 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 CDC42EP1Q00587 391 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 MDM2Q00987 491 aaPredicted RBP19.3■□□□□ 0.68
NXF1-216ENST00000533499 DMP1Q13316 513 aaPredicted RBP19.3■□□□□ 0.68
NXF1-216ENST00000533499 CUL4BQ13620 913 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 CAPSQ13938 189 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 ODR4Q5SWX8 454 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 KANK3Q6NY19 840 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 RPAINQ86UA6 219 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 CCDC65Q8IXS2 484 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 DAW1Q8N136 415 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 TMEM199Q8N511 208 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 BADQ92934 168 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 TRIM9Q9C026 710 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 PANK4Q9NVE7 773 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 HOOK1Q9UJC3 728 aaKnown RBP19.3■□□□□ 0.68
NXF1-216ENST00000533499 ODF2LQ9ULJ1 636 aa19.3■□□□□ 0.68
NXF1-216ENST00000533499 GTPBP6O43824 516 aaPredicted RBP19.29■□□□□ 0.68
NXF1-216ENST00000533499 GPR32O75388 356 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 PRR29P0C7W0 189 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 CRYBB1P53674 252 aaPredicted RBP19.29■□□□□ 0.68
NXF1-216ENST00000533499 MLLT1Q03111 559 aaPredicted RBP19.29■□□□□ 0.68
NXF1-216ENST00000533499 MAPK7Q13164 816 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 HERC4Q5GLZ8 1057 aaPredicted RBP19.29■□□□□ 0.68
NXF1-216ENST00000533499 ZNF410Q86VK4 478 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 ZBTB8OSQ8IWT0 167 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 C7orf25Q9BPX7 421 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 ADAMTS10Q9H324 1103 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 KMT5AQ9NQR1 393 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 LARSQ9P2J5 1176 aaKnown RBP19.29■□□□□ 0.68
NXF1-216ENST00000533499 SCN5AQ14524 2016 aa19.29■□□□□ 0.68
NXF1-216ENST00000533499 INO80B-WBP1J3KQ70 363 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 SLC16A4O15374 487 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 RPS6KA5O75582 802 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 PLS3P13797 630 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 CSF2RAP15509 400 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 FGFR4P22455 802 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 RGS19P49795 217 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 SMTNP53814 917 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 RBL2Q08999 1139 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 MGAT3Q09327 533 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 NFX1Q12986 1120 aaKnown RBP19.28■□□□□ 0.68
NXF1-216ENST00000533499 PNOCQ13519 176 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 POSTNQ15063 836 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 CAMK4Q16566 473 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 TMEM132AQ24JP5 1023 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 FAM26DQ5JW98 314 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 MFSD5Q6N075 450 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
NXF1-216ENST00000533499 DNAJC19Q96DA6 116 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 TIGD1Q96MW7 591 aa19.28■□□□□ 0.68
NXF1-216ENST00000533499 INO80BQ9C086 356 aaPredicted RBP19.28■□□□□ 0.68
NXF1-216ENST00000533499 K7ENM7 598 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 GAP43P17677 238 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 IBSPP21815 317 aaPredicted RBP19.27■□□□□ 0.68
NXF1-216ENST00000533499 NAMPTP43490 491 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 NPTX2P47972 431 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 FPGSQ05932 587 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 PAK2Q13177 524 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 LPIN1Q14693 890 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 MBTPS1Q14703 1052 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 FBXO47Q5MNV8 452 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 TRAF7Q6Q0C0 670 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 ZNF710Q8N1W2 664 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 TMEM40Q8WWA1 233 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 ERCC4Q92889 916 aaPredicted RBP19.27■□□□□ 0.68
NXF1-216ENST00000533499 OSBPL7Q9BZF2 842 aa19.27■□□□□ 0.68
NXF1-216ENST00000533499 NOC2LQ9Y3T9 749 aaKnown RBP19.27■□□□□ 0.68
NXF1-216ENST00000533499 H0YGN5 161 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 TRAK2O60296 914 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 NBNO60934 754 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 MBD3O95983 291 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 ACRP10323 421 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 DARSP14868 501 aaKnown RBP19.26■□□□□ 0.67
NXF1-216ENST00000533499 EIF4BP23588 611 aaKnown RBP19.26■□□□□ 0.67
NXF1-216ENST00000533499 CD52P31358 61 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 CATSPER4Q7RTX7 472 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 FAM178BQ8IXR5 827 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 GPT2Q8TD30 523 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 C2orf40Q9H1Z8 148 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 MRPL44Q9H9J2 332 aaKnown RBP19.26■□□□□ 0.67
NXF1-216ENST00000533499 C17orf75Q9HAS0 396 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 EXOC1Q9NV70 894 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 TANC1Q9C0D5 1861 aa19.26■□□□□ 0.67
NXF1-216ENST00000533499 ERLIN2O94905 339 aa19.25■□□□□ 0.67
NXF1-216ENST00000533499 SMC2O95347 1197 aa19.25■□□□□ 0.67
NXF1-216ENST00000533499 SFPQP23246 707 aaKnown RBP eCLIP19.25■□□□□ 0.67
NXF1-216ENST00000533499 NMT1P30419 496 aaKnown RBP19.25■□□□□ 0.67
NXF1-216ENST00000533499 RFC2P35250 354 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms