RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAPH1Q70E73 1250 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.83■□□□□ 0.6
PHRF1-205ENST00000533464 HSPH1Q92598 858 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 ZNF668Q96K58 619 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-205ENST00000533464 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-205ENST00000533464 SRGNP10124 158 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 ARMCX2Q7L311 632 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 ZNF564Q8TBZ8 553 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-205ENST00000533464 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 POLR3FQ9H1D9 316 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-205ENST00000533464 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 AGPAT5Q9NUQ2 364 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 BCAP29Q9UHQ4 241 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 FDX1P10109 184 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-205ENST00000533464 PHLDB3Q6NSJ2 640 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 CENPUQ71F23 418 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 CYFIP1Q7L576 1253 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 NUF2Q9BZD4 464 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 HMGCS2P54868 508 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 ADCY2Q08462 1091 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 NUP85Q9BW27 656 aa18.82■□□□□ 0.6
PHRF1-205ENST00000533464 BAG2O95816 211 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 GGCXP38435 758 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 KCNJ6P48051 423 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 MUM1Q2TAK8 710 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 PPP6R3Q5H9R7 873 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 GDAP1Q8TB36 358 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 CA4P22748 312 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 RNASELQ05823 741 aaKnown RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 PDCLQ13371 301 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SPDYE16A6NNV3 312 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 APOBEC3FQ8IUX4 373 aaKnown RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 TC2NQ8N9U0 490 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SPATA31A5Q5VU36 1347 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SPATA31A7Q8IWB4 1347 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SOX5P35711 763 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 RBM41Q96IZ5 413 aaKnown RBP18.81■□□□□ 0.6
PHRF1-205ENST00000533464 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.63e-7■■■□□ 16
PHRF1-205ENST00000533464 PRR12Q9ULL5 1215 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
PHRF1-205ENST00000533464 SESN3P58005 492 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 REEP2Q9BRK0 252 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 LPXNO60711 386 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 ENTPD3O75355 529 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 PHKA2P46019 1235 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 RNF25Q96BH1 459 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-205ENST00000533464 SRGAP2BP0DMP2 458 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 YWHABP31946 246 aaKnown RBP18.8■□□□□ 0.6
PHRF1-205ENST00000533464 SART1O43290 800 aaKnown RBP18.8■□□□□ 0.6
PHRF1-205ENST00000533464 TADA3O75528 432 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 FBXL13Q8NEE6 735 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 SPATA4Q8NEY3 305 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 OTUD5Q96G74 571 aa18.8■□□□□ 0.6
PHRF1-205ENST00000533464 MTMR2Q13614 643 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RCN2Q14257 317 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RFFLQ8WZ73 363 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 GINM1Q9NU53 330 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 IPO11Q9UI26 975 aaKnown RBP18.79■□□□□ 0.6
PHRF1-205ENST00000533464 WDR91A4D1P6 747 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 ASPHQ12797 758 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 KLHL29Q96CT2 875 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 ITIH6Q6UXX5 1313 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 GPC4O75487 556 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RFX1P22670 979 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 TBX3O15119 743 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 CALB1P05937 261 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 TBXAS1P24557 533 aaPredicted RBP18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RASGRP2Q7LDG7 609 aa18.79■□□□□ 0.6
PHRF1-205ENST00000533464 RBAKQ9NYW8 714 aaPredicted RBP18.79■□□□□ 0.6
PHRF1-205ENST00000533464 PFDN6O15212 129 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 GNA15P30679 374 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 GPC3P51654 580 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 PTPAQ15257 358 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 DSTYKQ6XUX3 929 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 CFAP36Q96G28 342 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 SLC9A2Q9UBY0 812 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 NCOA3Q9Y6Q9 1424 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 SLC8A1P32418 973 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 PPP4CP60510 307 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 FAM133BQ5BKY9 247 aaKnown RBP18.78■□□□□ 0.6
PHRF1-205ENST00000533464 TRIM68Q6AZZ1 485 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 PCGF5Q86SE9 256 aa18.78■□□□□ 0.6
PHRF1-205ENST00000533464 SCYL3Q8IZE3 742 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms