RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CMTR1Q8N1G2 835 aaKnown RBP8.86□□□□□ -0.99
NXF1-215ENST00000533440 SLC44A3Q8N4M1 653 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 METTL13Q8N6R0 699 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 CMASQ8NFW8 434 aaPredicted RBP8.86□□□□□ -0.99
NXF1-215ENST00000533440 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
NXF1-215ENST00000533440 RSAD2Q8WXG1 361 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 NXPE3Q969Y0 559 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 KLHL5Q96PQ7 755 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 MTA3Q9BTC8 594 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 VN1R3Q9BXE9 311 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 NRDE2Q9H7Z3 1164 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 TBC1D17Q9HA65 648 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 CACNA1IQ9P0X4 2223 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 hCG_1642624A0A1W2PR95 340 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 DDX39AO00148 427 aaKnown RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 ZC3H11AO75152 810 aaKnown RBP eCLIP8.85□□□□□ -0.99
NXF1-215ENST00000533440 PAPLNO95428 1278 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 FOSP01100 380 aaPredicted RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 DCNP07585 359 aaKnown RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 SRFP11831 508 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 DARSP14868 501 aaKnown RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 SDHBP21912 280 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 SREBF1P36956 1147 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 GPC3P51654 580 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 NUCB1Q02818 461 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 PTH1RQ03431 593 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 NONOQ15233 471 aaKnown RBP eCLIP8.85□□□□□ -0.99
NXF1-215ENST00000533440 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 EFCAB12Q6NXP0 572 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 MAML2Q8IZL2 1156 aaPredicted RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 BORCS6Q96GS4 357 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 PGBD1Q96JS3 809 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 EMILIN2Q9BXX0 1053 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 ANO3Q9BYT9 981 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 WDR6Q9NNW5 1121 aaKnown RBP8.85□□□□□ -0.99
NXF1-215ENST00000533440 RIC8AQ9NPQ8 531 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 CHST12Q9NRB3 414 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 TBC1D13Q9NVG8 400 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 DACT1Q9NYF0 836 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 CA14Q9ULX7 337 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 CEP131Q9UPN4 1083 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 AKT3Q9Y243 479 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 SIT1Q9Y3P8 196 aa8.85□□□□□ -0.99
NXF1-215ENST00000533440 DOCK8Q8NF50 2099 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 IGLV3-22A0A075B6J6 115 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 POTEMA6NI47 508 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 FAM86B1E9PN63 330 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 KINO60870 393 aaKnown RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 CNPP09543 421 aaKnown RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 FAM86B2P0C5J1 330 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 GLULP15104 373 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 FGFR4P22455 802 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 RFX1P22670 979 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 KLRC2P26717 231 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 TMOD1P28289 359 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 PHKA2P46019 1235 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 SLC11A1P49279 550 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 ATXN1P54253 815 aaKnown RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 SPECC1Q5M775 1068 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 WWC2Q6AWC2 1192 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 TYW1BQ6NUM6 668 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 TMTC3Q6ZXV5 915 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 HEATR3Q7Z4Q2 680 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 TMTC2Q8N394 836 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 LRRC71Q8N4P6 559 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 GPR152Q8TDT2 470 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 MYADMQ96S97 322 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 ARHGEF3Q9NR81 526 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 DNAJB4Q9UDY4 337 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 STK39Q9UEW8 545 aa8.84□□□□□ -0.99
NXF1-215ENST00000533440 MYH9P35579 1960 aaKnown RBP8.84□□□□□ -0.99
NXF1-215ENST00000533440 MAP1BP46821 2468 aaKnown RBP8.83□□□□□ -1
NXF1-215ENST00000533440 CHD6Q8TD26 2715 aa8.83□□□□□ -1
NXF1-215ENST00000533440 CLUHO75153 1309 aa8.83□□□□□ -1
NXF1-215ENST00000533440 CCDC195A0A1B0GUA6 201 aa8.83□□□□□ -1
NXF1-215ENST00000533440 IPO5O00410 1097 aaKnown RBP8.83□□□□□ -1
NXF1-215ENST00000533440 SH2B2O14492 632 aaPredicted RBP8.83□□□□□ -1
NXF1-215ENST00000533440 B4GALT3O60512 393 aa8.83□□□□□ -1
NXF1-215ENST00000533440 ZNF623O75123 536 aa8.83□□□□□ -1
NXF1-215ENST00000533440 OFD1O75665 1012 aa8.83□□□□□ -1
NXF1-215ENST00000533440 CALM1P0DP23 149 aa8.83□□□□□ -1
NXF1-215ENST00000533440 CALM2P0DP24 149 aa8.83□□□□□ -1
NXF1-215ENST00000533440 CALM3P0DP25 149 aa8.83□□□□□ -1
NXF1-215ENST00000533440 RXRAP19793 462 aa8.83□□□□□ -1
NXF1-215ENST00000533440 GBP2P32456 591 aaPredicted RBP8.83□□□□□ -1
NXF1-215ENST00000533440 LIFRP42702 1097 aa8.83□□□□□ -1
NXF1-215ENST00000533440 STARD6P59095 220 aa8.83□□□□□ -1
NXF1-215ENST00000533440 AP3B2Q13367 1082 aa8.83□□□□□ -1
NXF1-215ENST00000533440 ZNF528Q3MIS6 628 aa8.83□□□□□ -1
NXF1-215ENST00000533440 NOMO2Q5JPE7 1267 aa8.83□□□□□ -1
NXF1-215ENST00000533440 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms