RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
GMDS-210ENST00000533279 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
GMDS-210ENST00000533279 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
GMDS-210ENST00000533279 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
GMDS-210ENST00000533279 UBE4BO95155 1302 aa12.54□□□□□ -0.4
GMDS-210ENST00000533279 PSMA7O14818 248 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 B4GALT4O60513 344 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 ERLIN2O94905 339 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 RHOBTB3O94955 611 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
GMDS-210ENST00000533279 VTNP04004 478 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 SRGAP2CP0DJJ0 459 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 COL6A1P12109 1028 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 EN2P19622 333 aaPredicted RBP12.53□□□□□ -0.4
GMDS-210ENST00000533279 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■□□□□ 10.9
GMDS-210ENST00000533279 ARL2P36404 184 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 ZNF131P52739 623 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 MRPS6P82932 125 aaKnown RBP12.53□□□□□ -0.4
GMDS-210ENST00000533279 PCBP1Q15365 356 aaKnown RBP eCLIP12.53□□□□□ -0.4
GMDS-210ENST00000533279 STX1AQ16623 288 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 MARCH8Q5T0T0 291 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 LRRC15Q8TF66 581 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 DNAJB3Q8WWF6 145 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 DNAJC19Q96DA6 116 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 BICD1Q96G01 975 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
GMDS-210ENST00000533279 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
GMDS-210ENST00000533279 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
GMDS-210ENST00000533279 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 SFI1A8K8P3 1242 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 ADAM17P78536 824 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
GMDS-210ENST00000533279 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 MAPK6Q16659 721 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
GMDS-210ENST00000533279 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 HS2ST1Q7LGA3 356 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 RPAINQ86UA6 219 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 PPP1R13LQ8WUF5 828 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 TSG101Q99816 390 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 TRPV6Q9H1D0 765 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 TMEM63CQ9P1W3 806 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 GRIN2DO15399 1336 aa12.52□□□□□ -0.41
GMDS-210ENST00000533279 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 K7ERI5 159 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 BIN1O00499 593 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 EIF3DO15371 548 aaKnown RBP eCLIP12.51□□□□□ -0.41
GMDS-210ENST00000533279 SLC16A4O15374 487 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CLTBP09497 229 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CTSHP09668 335 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 GLRA2P23416 452 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CASP1P29466 404 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 NPTX2P47972 431 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CDK7P50613 346 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 GPC3P51654 580 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CRYBB1P53674 252 aaPredicted RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 SOX10P56693 466 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 NLRP11P59045 1033 aaKnown RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 TLE2Q04725 743 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 MAPK7Q13164 816 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CAPSQ13938 189 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 SNX17Q15036 470 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 ASAP3Q8TDY4 903 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 NFKBIZQ9BYH8 718 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 PRMT7Q9NVM4 692 aaPredicted RBP12.51□□□□□ -0.41
GMDS-210ENST00000533279 TBC1D7Q9P0N9 293 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 MAN1B1Q9UKM7 699 aa12.51□□□□□ -0.41
GMDS-210ENST00000533279 CDY2AQ9Y6F7 541 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms