RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MYLIPQ8WY64 445 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 YME1L1Q96TA2 773 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 PRDM12Q9H4Q4 367 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 MYH15Q9Y2K3 1946 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 ARHGEF35A5YM69 484 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 CYP11B2P19099 503 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 GLRA2P23416 452 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 CAPSQ13938 189 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 PADI6Q6TGC4 694 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 RNF149Q8NC42 400 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 PNMA5Q96PV4 448 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 BHMT2Q9H2M3 363 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 MINDY3Q9H8M7 445 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 TRANK1O15050 2925 aa22.73■■□□□ 1.23
CCS-208ENST00000533244 MYO9BQ13459 2157 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 SLC26A4O43511 780 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 EYA4O95677 639 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 STAG3L1P0CL83 205 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 SRGAP2CP0DJJ0 459 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 LONP1P36776 959 aaKnown RBP22.72■■□□□ 1.23
CCS-208ENST00000533244 ERVK-21P61565 698 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 GRIN1Q05586 938 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 KCNK18Q7Z418 384 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 USP28Q96RU2 1077 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 NFKBIZQ9BYH8 718 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 POLR3FQ9H1D9 316 aaPredicted RBP22.72■■□□□ 1.23
CCS-208ENST00000533244 ELAC1Q9H777 363 aaKnown RBP22.72■■□□□ 1.23
CCS-208ENST00000533244 GPRC5CQ9NQ84 441 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 CHST12Q9NRB3 414 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 DNM3Q9UQ16 869 aa22.72■■□□□ 1.23
CCS-208ENST00000533244 ADGRA3Q8IWK6 1321 aa22.71■■□□□ 1.23
CCS-208ENST00000533244 E9PMD0 336 aa22.71■■□□□ 1.23
CCS-208ENST00000533244 PTENP60484 403 aa22.71■■□□□ 1.23
CCS-208ENST00000533244 GRB10Q13322 594 aa22.71■■□□□ 1.23
CCS-208ENST00000533244 TGS1Q96RS0 853 aaKnown RBP22.71■■□□□ 1.23
CCS-208ENST00000533244 TRAIPQ9BWF2 469 aa22.71■■□□□ 1.23
CCS-208ENST00000533244 RNF216Q9NWF9 866 aaPredicted RBP22.71■■□□□ 1.23
CCS-208ENST00000533244 COL6A3P12111 3177 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 EPOPA6NHQ4 379 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 LINC00271P0C7V0 271 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 ZSCAN22P10073 491 aaPredicted RBP22.7■■□□□ 1.22
CCS-208ENST00000533244 ZSCAN20P17040 1043 aaPredicted RBP22.7■■□□□ 1.22
CCS-208ENST00000533244 PHKA2P46019 1235 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 TFDP1Q14186 410 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 TMEM119Q4V9L6 283 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 NT5C3AQ9H0P0 336 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 AGPAT5Q9NUQ2 364 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 TMEM161AQ9NX61 479 aa22.7■■□□□ 1.22
CCS-208ENST00000533244 FBXO2Q9UK22 296 aaPredicted RBP22.7■■□□□ 1.22
CCS-208ENST00000533244 NASPP49321 788 aaPredicted RBP22.69■■□□□ 1.22
CCS-208ENST00000533244 ADGRE1Q14246 886 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCS-208ENST00000533244 CATSPER4Q7RTX7 472 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 CABP7Q86V35 215 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 SPRYD3Q8NCJ5 442 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 CERS4Q9HA82 394 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 DACT1Q9NYF0 836 aa22.69■■□□□ 1.22
CCS-208ENST00000533244 SRPRBQ9Y5M8 271 aaKnown RBP22.69■■□□□ 1.22
CCS-208ENST00000533244 COL4A4P53420 1690 aaPredicted RBP22.69■■□□□ 1.22
CCS-208ENST00000533244 RALGAPA2Q2PPJ7 1873 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 A0A0U1RQF3 1178 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 F13A1P00488 732 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 FOSL2P15408 326 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 PKP1Q13835 747 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 SLC39A14Q15043 492 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 MAEAQ7L5Y9 396 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 ECHDC2Q86YB7 292 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 CMTR2Q8IYT2 770 aaKnown RBP22.68■■□□□ 1.22
CCS-208ENST00000533244 ARNTL2Q8WYA1 636 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 SAMD11Q96NU1 681 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 LRFN2Q9ULH4 789 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 PCDHB7Q9Y5E2 793 aa22.68■■□□□ 1.22
CCS-208ENST00000533244 FNDC1Q4ZHG4 1894 aaPredicted RBP22.68■■□□□ 1.22
CCS-208ENST00000533244 MBTD1Q05BQ5 628 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 FAM102BQ5T8I3 360 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 CDCA2Q69YH5 1023 aaPredicted RBP22.67■■□□□ 1.22
CCS-208ENST00000533244 ZNF598Q86UK7 904 aaKnown RBP22.67■■□□□ 1.22
CCS-208ENST00000533244 FIBCD1Q8N539 461 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 BSNDQ8WZ55 320 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 CLP1Q92989 425 aaKnown RBP22.67■■□□□ 1.22
CCS-208ENST00000533244 GAS2L1Q99501 681 aaPredicted RBP22.67■■□□□ 1.22
CCS-208ENST00000533244 C17orf80Q9BSJ5 609 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 PIN4Q9Y237 131 aaKnown RBP22.67■■□□□ 1.22
CCS-208ENST00000533244 NLRC5Q86WI3 1866 aa22.67■■□□□ 1.22
CCS-208ENST00000533244 ATF7P17544 494 aaPredicted RBP22.66■■□□□ 1.22
CCS-208ENST00000533244 POU3F3P20264 500 aaPredicted RBP22.66■■□□□ 1.22
CCS-208ENST00000533244 MARCKSP29966 332 aaPredicted RBP22.66■■□□□ 1.22
CCS-208ENST00000533244 HOXA11P31270 313 aaPredicted RBP22.66■■□□□ 1.22
CCS-208ENST00000533244 UBA7P41226 1012 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 CEBPZQ03701 1054 aaKnown RBP22.66■■□□□ 1.22
CCS-208ENST00000533244 AMHR2Q16671 573 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 RINT1Q6NUQ1 792 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 LRRC15Q8TF66 581 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 CCSER1Q9C0I3 900 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 CSRNP2Q9H175 543 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 RNF19AQ9NV58 838 aa22.66■■□□□ 1.22
CCS-208ENST00000533244 RFXAPO00287 272 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 LPXNO60711 386 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 GATMP50440 423 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 BTG3Q14201 252 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms