RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TOM1L1O75674 476 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 ACSL3O95573 720 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 NR3C1P04150 777 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 KRT33BQ14525 404 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 CC2D1AQ6P1N0 951 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 CLEC4GQ6UXB4 293 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 PROM2Q8N271 834 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 C7orf31Q8N865 590 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 DNAAF3Q8N9W5 541 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 DEAF1O75398 565 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 TADA3O75528 432 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 PRELPP51888 382 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 RCAN1P53805 252 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 CACNB3P54284 484 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 TBCCQ15814 346 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 FOXP4Q8IVH2 680 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 CNPY4Q8N129 248 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 MCUQ8NE86 351 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 ZNF341Q9BYN7 854 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 ING2Q9H160 280 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 GH2P01242 217 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 KRT14P02533 472 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 MARK3P27448 753 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 CRKP46108 304 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 FASTKD5Q7L8L6 764 aaKnown RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 COL15A1P39059 1388 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 ARHGEF40Q8TER5 1519 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 TULP4Q9NRJ4 1543 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 DYTNA2CJ06 578 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 FOXN1O15353 648 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 SRGAP2CP0DJJ0 459 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 FAM83BQ5T0W9 1011 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 METTL23Q86XA0 190 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 SLC44A5Q8NCS7 719 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 RPF1Q9H9Y2 349 aaKnown RBP8.67□□□□□ -1.02
CTNND1-234ENST00000532844 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
CTNND1-234ENST00000532844 ZNF233A6NK53 670 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L10C9JJH3 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 H3BRJ5 948 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CCDC188H7C350 402 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 HMGB3O15347 200 aaKnown RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 TEX33O43247 280 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 NCK2O43639 380 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 GGCXP38435 758 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 MYO1EQ12965 1108 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 TXNRD1Q16881 649 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 Q3C1V9 767 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 BBS9Q3SYG4 887 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 SLC13A4Q9UKG4 626 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PRR23D1E9PI22 279 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PRR23D2P0DMB1 279 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PSMA2P25787 234 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 GNL1P36915 607 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 JAK3P52333 1124 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 IRX1P78414 480 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CLEC17AQ6ZS10 378 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CENPUQ71F23 418 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 KIF2CQ99661 725 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CHCHD3Q9NX63 227 aaKnown RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 FIS1Q9Y3D6 152 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ABCB11O95342 1321 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PP2D1A8MPX8 630 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 TTI1O43156 1089 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ESRRAP11474 423 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 IQCB1Q15051 598 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 SURF1Q15526 300 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ALX1Q15699 326 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 USP17L6PQ6QN14 398 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ELMOD1Q8N336 334 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 RNF217Q8TC41 542 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CEP95Q96GE4 821 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 SPATA31A3Q5VYP0 1347 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CEP152O94986 1710 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 ANO9A1A5B4 782 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 POTECB2RU33 542 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 HDLBPQ00341 1268 aaKnown RBP8.66□□□□□ -1.02
CTNND1-234ENST00000532844 CDO1Q16878 200 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 SUPT20HL1Q3ZLR7 823 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 NFRKBQ6P4R8 1299 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 PYROXD1Q8WU10 500 aa8.66□□□□□ -1.02
CTNND1-234ENST00000532844 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms