RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 RBM46Q8TBY0 533 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 ZNF483Q8TF39 744 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 C18orf25Q96B23 403 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 ZBTB10Q96DT7 871 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MRPL1Q9BYD6 325 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 UBXN6Q9BZV1 441 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 E5RI56 91 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 ZNF189O75820 626 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 ABCB1P08183 1280 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 LRRC74AQ0VAA2 488 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TAB1Q15750 504 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 C2CD6Q53TS8 623 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 C8orf58Q8NAV2 365 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 GANCQ8TET4 914 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MLXIPQ9HAP2 919 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 UBA2Q9UBT2 640 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PYCARDQ9ULZ3 195 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 IFT140Q96RY7 1462 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 EIF3HO15372 352 aaKnown RBP eCLIP8.61□□□□□ -1.032e-7■■□□□ 12
CTNND1-231ENST00000532463 DDHD2O94830 711 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 LCA5LO95447 670 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CXCR5P32302 372 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 RPS6P62753 249 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TFDP1Q14186 410 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CRYMQ14894 314 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 NCF4Q15080 339 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 LRRC36Q1X8D7 754 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 GLMNQ92990 594 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 FRMD6Q96NE9 622 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 RMI1Q9H9A7 625 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 LCMT1Q9UIC8 334 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TTC21BQ7Z4L5 1316 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 SUPT3HB4E1H0 165 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 APOA4P06727 396 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CMA1P23946 247 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 BTN3A2P78410 334 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 KRT31Q15323 416 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 RBBP7Q16576 425 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TRIQKQ629K1 86 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 KSR2Q6VAB6 950 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PCYOX1LQ8NBM8 494 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TNIP2Q8NFZ5 429 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MRPL48Q96GC5 212 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 IMPAD1Q9NX62 359 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PSD3Q9NYI0 1048 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 A0A0B4J269 797 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PRPF4O43172 522 aaKnown RBP eCLIP8.61□□□□□ -1.034e-8■□□□□ 10.4
CTNND1-231ENST00000532463 SRP72O76094 671 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 BAIAP3O94812 1187 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PIK3R1P27986 724 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 PSMC2P35998 433 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 TUBB3Q13509 450 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 ZNF568Q3ZCX4 644 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 KLHL17Q6TDP4 642 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 SFR1Q86XK3 245 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CCDC60Q8IWA6 550 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 RNF139Q8WU17 664 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 DDX17Q92841 729 aaKnown RBP8.61□□□□□ -1.03
CTNND1-231ENST00000532463 MTA3Q9BTC8 594 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 CEP44Q9C0F1 390 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
CTNND1-231ENST00000532463 USP1O94782 785 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 UBTFL6P0CB48 400 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-231ENST00000532463 SLC7A5Q01650 507 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 OR6B2Q6IFH4 312 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 PLEKHA7Q6IQ23 1121 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 ZNF544Q6NX49 715 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 FBXO38Q6PIJ6 1188 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 RNFT2Q96EX2 444 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 CATSPER2Q96P56 530 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 FSD1LQ9BXM9 530 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 DCTPP1Q9H773 170 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 ATAD3AQ9NVI7 634 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 MOSPD1Q9UJG1 213 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 MAST3O60307 1309 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 SMCO3A2RU48 225 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 S100A1P23297 94 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 CTCFP49711 727 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-231ENST00000532463 PPIDQ08752 370 aaKnown RBP8.6□□□□□ -1.03
CTNND1-231ENST00000532463 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 ZCWPW2Q504Y3 356 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 KIAA1755Q5JYT7 1200 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 SPATA21Q7Z572 469 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 RHOT2Q8IXI1 618 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 GALNT4Q8N4A0 578 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 RAB42Q8N4Z0 105 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 RASSF5Q8WWW0 418 aa8.6□□□□□ -1.03
CTNND1-231ENST00000532463 TUBA8Q9NY65 449 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms