RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 CLLU1OSQ5K130 101 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
CMTM1-215ENST00000531885 ELMSAN1Q6PJG2 1045 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 DHX32Q7L7V1 743 aaKnown RBP13.04□□□□□ -0.32
CMTM1-215ENST00000531885 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 GCOM2Q9BZD3 368 aaPredicted RBP13.04□□□□□ -0.32
CMTM1-215ENST00000531885 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
CMTM1-215ENST00000531885 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 CHST12Q9NRB3 414 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 SPTBN4Q9H254 2564 aa13.04□□□□□ -0.32
CMTM1-215ENST00000531885 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 ASGR2P07307 311 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
CMTM1-215ENST00000531885 SFNP31947 248 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 GPC3P51654 580 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 JAK3P52333 1124 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 PRKCEQ02156 737 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
CMTM1-215ENST00000531885 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 EMILIN2Q9BXX0 1053 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 ZBP1Q9H171 429 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 SFXN1Q9H9B4 322 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
CMTM1-215ENST00000531885 CHMP2AO43633 222 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 GAS7O60861 476 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 CTSAP10619 480 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 RAB27AP51159 221 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 FUT2Q10981 343 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 ASCL5Q7RTU5 278 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
CMTM1-215ENST00000531885 URGCPQ8TCY9 931 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.33
CMTM1-215ENST00000531885 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.33
CMTM1-215ENST00000531885 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 DPP7Q9UHL4 492 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
CMTM1-215ENST00000531885 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 PHKA2P46019 1235 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 NONOQ15233 471 aaKnown RBP eCLIP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 ERMP1Q7Z2K6 904 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 C12orf76Q8N812 135 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 IGSF21Q96ID5 467 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 TEKT3Q9BXF9 490 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 SEPT9Q9UHD8 586 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 PIN4Q9Y237 131 aaKnown RBP13.01□□□□□ -0.33
CMTM1-215ENST00000531885 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 IRAK3Q9Y616 596 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 WDR87Q6ZQQ6 2873 aa13.01□□□□□ -0.33
CMTM1-215ENST00000531885 STK25O00506 426 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 EPCAMP16422 314 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 FGFR4P22455 802 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 KLRC2P26717 231 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 TDGQ13569 410 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
CMTM1-215ENST00000531885 MTERF2Q49AM1 385 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 ZNF410Q86VK4 478 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 RDM1Q8NG50 284 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 CRYGNQ8WXF5 182 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 AUTS2Q8WXX7 1259 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 STAMQ92783 540 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 RIT2Q99578 217 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 GBP3Q9H0R5 595 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
CMTM1-215ENST00000531885 DCHS1Q96JQ0 3298 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 ZNF862O60290 1169 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 CDC27P30260 824 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 CIITAP33076 1130 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
CMTM1-215ENST00000531885 ID4P47928 161 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
CMTM1-215ENST00000531885 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
CMTM1-215ENST00000531885 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms