RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CASC1Q6TDU7 716 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 ZNF280BQ86YH2 543 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 NECTIN4Q96NY8 510 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 NRDE2Q9H7Z3 1164 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 RIC8AQ9NPQ8 531 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 CYP26B1Q9NR63 512 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 TDRD15B5MCY1 1934 aaKnown RBP10.17□□□□□ -0.78
USF1-210ENST00000531842 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 F8W810 466 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 C2CD2LO14523 706 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SGSM2O43147 1006 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 ZSCAN20P17040 1043 aaPredicted RBP10.17□□□□□ -0.78
USF1-210ENST00000531842 SMARCA1P28370 1054 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SREBF1P36956 1147 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SLC11A1P49279 550 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 GPC3P51654 580 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 ADCY7P51828 1080 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 TDGQ13569 410 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 MIS18BP1Q6P0N0 1132 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 TAS1R1Q7RTX1 841 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 DGLUCYQ7Z3D6 616 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 CABP7Q86V35 215 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 MAP4K1Q92918 833 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 TMEM169Q96HH4 297 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 MAP3K14Q99558 947 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 LZTS2Q9BRK4 669 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 CNTNAP3Q9BZ76 1288 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 DUSP12Q9UNI6 340 aa10.17□□□□□ -0.78
USF1-210ENST00000531842 MAFBQ9Y5Q3 323 aaPredicted RBP10.17□□□□□ -0.78
USF1-210ENST00000531842 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
USF1-210ENST00000531842 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 IPO5O00410 1097 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 RFPL2O75678 378 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 DDHD2O94830 711 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 CNPP09543 421 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 CTSAP10619 480 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 DARSP14868 501 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 EIF4BP23588 611 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 ALDH7A1P49419 539 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 GNAQP50148 359 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 SLC26A2P50443 739 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 FUT2Q10981 343 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 GPR149Q86SP6 731 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 KSR1Q8IVT5 923 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 TNPO1Q92973 898 aaKnown RBP10.16□□□□□ -0.78
USF1-210ENST00000531842 IGSF21Q96ID5 467 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 KLHL5Q96PQ7 755 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 MYADMQ96S97 322 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 HINFPQ9BQA5 517 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 TBC1D13Q9NVG8 400 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 CFAP47Q6ZTR5 3102 aa10.16□□□□□ -0.78
USF1-210ENST00000531842 USP24Q9UPU5 2620 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 A0A0U1RQF3 1178 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 SLC27A2O14975 620 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 HOXA2O43364 376 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 CHMP2AO43633 222 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 EDIL3O43854 480 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 LMNAP02545 664 aaKnown RBP10.15□□□□□ -0.78
USF1-210ENST00000531842 GALTP07902 379 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 GLULP15104 373 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 GBP2P32456 591 aaPredicted RBP10.15□□□□□ -0.78
USF1-210ENST00000531842 MCM5P33992 734 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 CLCN4P51793 760 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 ODR4Q5SWX8 454 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 CCDC149Q6ZUS6 474 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 DDX53Q86TM3 631 aaKnown RBP10.15□□□□□ -0.78
USF1-210ENST00000531842 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 TMEM87AQ8NBN3 555 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 GPR152Q8TDT2 470 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 RUFY2Q8WXA3 655 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 B3GALT6Q96L58 329 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 FOXQ1Q9C009 403 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 TBC1D17Q9HA65 648 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 DZANK1Q9NVP4 752 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 USTQ9Y2C2 406 aa10.15□□□□□ -0.78
USF1-210ENST00000531842 CHD6Q8TD26 2715 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 A0A087WZ62 844 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 OFD1O75665 1012 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 SP9P0CG40 484 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 CALM1P0DP23 149 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 CALM2P0DP24 149 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 CALM3P0DP25 149 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 KLRC2P26717 231 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 CDC27P30260 824 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 PHKA2P46019 1235 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms