RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SLC7A3Q8WY07 619 aa24.97■■□□□ 1.59
TRAPPC4-210ENST00000531290 ZNF558Q96NG5 402 aa24.97■■□□□ 1.59
TRAPPC4-210ENST00000531290 POP1Q99575 1024 aaKnown RBP24.97■■□□□ 1.59
TRAPPC4-210ENST00000531290 CYP26B1Q9NR63 512 aa24.97■■□□□ 1.59
TRAPPC4-210ENST00000531290 RNF19AQ9NV58 838 aa24.97■■□□□ 1.59
TRAPPC4-210ENST00000531290 FAM86C2PA6NEL3 165 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 PER2O15055 1255 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 KRT2P35908 639 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 ERVFC1P60507 584 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 PLCB3Q01970 1234 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 KRT17Q04695 432 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 EPHA7Q15375 998 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 KCNT2Q6UVM3 1135 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 MRPS27Q92552 414 aaKnown RBP24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 MSLNLQ96KJ4 702 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 CEP170P1Q96L14 293 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 NLRP4Q96MN2 994 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 LZTS1Q9Y250 596 aa24.96■■□□□ 1.59
TRAPPC4-210ENST00000531290 FSD2A1L4K1 749 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 C19orf67A6NJJ6 358 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 PPM1AP35813 382 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 NPEPPSP55786 919 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 ME3Q16798 604 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 OTUD6AQ7L8S5 288 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 SLFN12Q8IYM2 578 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 HAS1Q92839 578 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 CDCA3Q99618 268 aaPredicted RBP24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 CLEC1BQ9P126 229 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 PPME1Q9Y570 386 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 NLRC5Q86WI3 1866 aa24.95■■□□□ 1.58
TRAPPC4-210ENST00000531290 EYA4O95677 639 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 SKIP12755 728 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 FDPSP14324 419 aaKnown RBP24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 NEK4P51957 841 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 POLGP54098 1239 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 NR5A1Q13285 461 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 CLLU1OSQ5K130 101 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 TWF2Q6IBS0 349 aaKnown RBP24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 NCAPH2Q6IBW4 605 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 CATSPER4Q7RTX7 472 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 ZNF598Q86UK7 904 aaKnown RBP24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 POTEDQ86YR6 584 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 KSR1Q8IVT5 923 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 HELQQ8TDG4 1101 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 GTF3C6Q969F1 213 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 SPG21Q9NZD8 308 aa24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 PIN4Q9Y237 131 aaKnown RBP24.94■■□□□ 1.58
TRAPPC4-210ENST00000531290 MYO7AQ13402 2215 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 DCXO43602 365 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 COASYQ13057 564 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 EARS2Q5JPH6 523 aaKnown RBP24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 C4orf19Q8IY42 314 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 TCF25Q9BQ70 676 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 TRAIPQ9BWF2 469 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 MRPL9Q9BYD2 267 aaKnown RBP24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 NGRNQ9NPE2 291 aaKnown RBP24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 C11orf16Q9NQ32 467 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 ENTPD7Q9NQZ7 604 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 BARX2Q9UMQ3 279 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 HCN4Q9Y3Q4 1203 aa24.93■■□□□ 1.58
TRAPPC4-210ENST00000531290 FSCN2O14926 492 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 YWHABP31946 246 aaKnown RBP24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 PBX3P40426 434 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 RFC5P40937 340 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 PHKA2P46019 1235 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 TRIM29Q14134 588 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 DUSP6Q16828 381 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 PLPP4Q5VZY2 271 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 ZNF579Q8NAF0 562 aaKnown RBP24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 LXNQ9BS40 222 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 ZSWIM4Q9H7M6 989 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 RGL1Q9NZL6 768 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 WRAP73Q9P2S5 460 aaPredicted RBP24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 COL4A3BPQ9Y5P4 624 aa24.92■■□□□ 1.58
TRAPPC4-210ENST00000531290 GLP2RO95838 553 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 SRGAP2BP0DMP2 458 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 ATF7P17544 494 aaPredicted RBP24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 ALDH7A1P49419 539 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 TMC7Q7Z402 723 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 SMRP1Q8NCR6 262 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 NSUN7Q8NE18 718 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 PRPF31Q8WWY3 499 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 PSPC1Q8WXF1 523 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 RSPH1Q8WYR4 309 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 DYDC2Q96IM9 177 aa24.91■■□□□ 1.58
TRAPPC4-210ENST00000531290 FAM205CA6NFA0 338 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 LARGE1O95461 756 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 SRGAP2CP0DJJ0 459 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 XKR9Q5GH70 373 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 GLB1LQ6UWU2 654 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 TPH2Q8IWU9 490 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 TMEM143Q96AN5 459 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 DHX33Q9H6R0 707 aaKnown RBP24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 PCDHA12Q9UN75 941 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 EVPLQ92817 2033 aa24.9■■□□□ 1.58
TRAPPC4-210ENST00000531290 MYH9P35579 1960 aaKnown RBP24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 PRR33A8MZF0 331 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 RAB27AP51159 221 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 CYP4A11Q02928 519 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 CTTNQ14247 550 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms