RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CUL4BQ13620 913 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CAPSQ13938 189 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 TFDP1Q14186 410 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 KIZQ2M2Z5 673 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 GPT2Q8TD30 523 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 BSNDQ8WZ55 320 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 NTPCRQ9BSD7 190 aaKnown RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 WNT8AQ9H1J5 351 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CDHR5Q9HBB8 845 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 PARVGQ9HBI0 331 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 LARSQ9P2J5 1176 aaKnown RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 HOOK1Q9UJC3 728 aaKnown RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 TNRC18O15417 2968 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-211ENST00000531041 A0A087WZ62 844 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-211ENST00000531041 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
SF3B2-211ENST00000531041 MBD3O95983 291 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 SRGAP2CP0DJJ0 459 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 PLS3P13797 630 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 PTMSP20962 102 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 ITGB8P26012 769 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 CASP1P29466 404 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 ASIC1P78348 528 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 POSTNQ15063 836 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 IFNLR1Q8IU57 520 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-211ENST00000531041 CCDC65Q8IXS2 484 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 RNF149Q8NC42 400 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 NLRP4Q96MN2 994 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 FDXACB1Q9BRP7 624 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-211ENST00000531041 NFKBIZQ9BYH8 718 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 BLZF1Q9H2G9 400 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 IFT122Q9HBG6 1241 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 SQORQ9Y6N5 450 aa18.72■□□□□ 0.59
SF3B2-211ENST00000531041 PVALEFA0A1B0GWK0 134 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 CAPN15O75808 1086 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 IDEP14735 1019 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 GAP43P17677 238 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 EIF4BP23588 611 aaKnown RBP18.71■□□□□ 0.59
SF3B2-211ENST00000531041 NPTX2P47972 431 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 PEX3P56589 373 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 PTENP60484 403 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 DPYDQ12882 1025 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 DMP1Q13316 513 aaPredicted RBP18.71■□□□□ 0.59
SF3B2-211ENST00000531041 MFSD5Q6N075 450 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 UNC13DQ70J99 1090 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 SPIRE2Q8WWL2 714 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 PPP1R16BQ96T49 567 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
SF3B2-211ENST00000531041 PANK4Q9NVE7 773 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 SEL1LQ9UBV2 794 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 GINS2Q9Y248 185 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 NR2E3Q9Y5X4 410 aa18.71■□□□□ 0.59
SF3B2-211ENST00000531041 LRRIQ4A6NIV6 560 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 PHKA2P46019 1235 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 SMTNP53814 917 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 CCL23P55773 120 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 MBTPS1Q14703 1052 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 MYCT1Q8N699 235 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 USP38Q8NB14 1042 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 ZNF668Q96K58 619 aaPredicted RBP18.7■□□□□ 0.58
SF3B2-211ENST00000531041 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 OSMRQ99650 979 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 ZHX3Q9H4I2 956 aa18.7■□□□□ 0.58
SF3B2-211ENST00000531041 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 KLRC4O43908 158 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 TRAK2O60296 914 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 DARSP14868 501 aaKnown RBP18.69■□□□□ 0.58
SF3B2-211ENST00000531041 RFC2P35250 354 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 PNOCQ13519 176 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 GPNMBQ14956 572 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 FBXO47Q5MNV8 452 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 CDCA2Q69YH5 1023 aaPredicted RBP18.69■□□□□ 0.58
SF3B2-211ENST00000531041 SRGAP1Q7Z6B7 1085 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 TMEM40Q8WWA1 233 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 SCLYQ96I15 445 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
SF3B2-211ENST00000531041 C2orf40Q9H1Z8 148 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 KMT5AQ9NQR1 393 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 OLFML3Q9NRN5 406 aa18.69■□□□□ 0.58
SF3B2-211ENST00000531041 ADGRA3Q8IWK6 1321 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 CCDC169A6NNP5 214 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 MAPTP10636 758 aaKnown RBP18.68■□□□□ 0.58
SF3B2-211ENST00000531041 SCP2P22307 547 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 NCKAP1LP55160 1127 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 EHHADHQ08426 723 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 COASYQ13057 564 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 LPIN1Q14693 890 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 HERC4Q5GLZ8 1057 aaPredicted RBP18.68■□□□□ 0.58
SF3B2-211ENST00000531041 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 ZBTB8OSQ8IWT0 167 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 FAM178BQ8IXR5 827 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 TMEM199Q8N511 208 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 SLC17A8Q8NDX2 589 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 SPATA20Q8TB22 786 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms