RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 NTPCRQ9BSD7 190 aaKnown RBP10.88□□□□□ -0.67
CTNND1-228ENST00000531007 TRIM5Q9C035 493 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 PDLIM7Q9NR12 457 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 PDGFCQ9NRA1 345 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 RNF186Q9NXI6 227 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-228ENST00000531007 COL1A2P08123 1366 aa10.88□□□□□ -0.67
CTNND1-228ENST00000531007 MYH9P35579 1960 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 CASP8AP2Q9UKL3 1982 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 A0A087WWV3 80 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 LRRC10BA6NIK2 292 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 PDXKO00764 312 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ZBTB39O15060 712 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 CALUO43852 315 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 HIP1RO75146 1068 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ADCY5O95622 1261 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 CYP2B6P20813 491 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 RPL13P26373 211 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 GGCXP38435 758 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ADCYAP1R1P41586 468 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 SP4Q02446 784 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ZNF484Q5JVG2 852 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 UTP14CQ5TAP6 766 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 CDKAL1Q5VV42 579 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 TTI2Q6NXR4 508 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 SMYD4Q8IYR2 804 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 OR6J1Q8NGC5 347 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 SCFD1Q8WVM8 642 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 IFT74Q96LB3 600 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 CEP63Q96MT8 703 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 PCYT2Q99447 389 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 DHX33Q9H6R0 707 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 FANCLQ9NW38 375 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 MAGEC2Q9UBF1 373 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 EXOC7Q9UPT5 735 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
CTNND1-228ENST00000531007 TRAF3IP3Q9Y228 551 aa10.87□□□□□ -0.67
CTNND1-228ENST00000531007 WDR81Q562E7 1941 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 NPHP3-ACAD11A0A0J9YXS1 232 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 A6NJR5 290 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 MAGEB2O15479 319 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 MAFO75444 373 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-228ENST00000531007 GCNT3O95395 438 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 SERPINC1P01008 464 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 SMPD1P17405 629 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-228ENST00000531007 NCKAP1LP55160 1127 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 NKX3-2P78367 333 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 FANCCQ00597 558 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 MAPK7Q13164 816 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 HS2ST1Q7LGA3 356 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 DAW1Q8N136 415 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 CSGALNACT2Q8N6G5 542 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 RETREG2Q8NC44 543 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 STRA6Q9BX79 667 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 AP5M1Q9H0R1 490 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 HSD3B7Q9H2F3 369 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 SPC25Q9HBM1 224 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 TYW1Q9NV66 732 aaKnown RBP10.86□□□□□ -0.67
CTNND1-228ENST00000531007 MCM3APO60318 1980 aa10.86□□□□□ -0.67
CTNND1-228ENST00000531007 RRN3P2A6NIE6 340 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 GPR25O00155 361 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 ASAP2O43150 1006 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 ZEB2O60315 1214 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
CTNND1-228ENST00000531007 TBC1D8O95759 1140 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 LGALS2P05162 132 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 MMP3P08254 477 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 ATP4AP20648 1035 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 FLT3LGP49771 235 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 DNM2P50570 870 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 ZNF75DP51815 510 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 NPEPPSP55786 919 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 STX17P56962 302 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 UBASH3AP57075 661 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 GTF2BQ00403 316 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 CDC42EP1Q00587 391 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 RAD51AP2Q09MP3 1159 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-228ENST00000531007 EMC2Q15006 297 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 PLCB4Q15147 1175 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
CTNND1-228ENST00000531007 IER5Q5VY09 327 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms