RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 POU3F3P20264 500 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 FAM189BP81408 668 aa16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 BTG3Q14201 252 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 MXD4Q14582 209 aaPredicted RBP16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
PPFIA1-216ENST00000530746 LPXNO60711 386 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 GRB10Q13322 594 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 ECM1Q16610 540 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 EPC2Q52LR7 807 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 ARL6IP4Q66PJ3 421 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 TMEM192Q8IY95 271 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 RNF149Q8NC42 400 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 SNX29Q8TEQ0 813 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
PPFIA1-216ENST00000530746 PP2D1A8MPX8 630 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 ARL2P36404 184 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 TFDP1Q14186 410 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 GDPD5Q8WTR4 605 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 CLP1Q92989 425 aaKnown RBP16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 MTCH2Q9Y6C9 303 aa16.61■□□□□ 0.25
PPFIA1-216ENST00000530746 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 BMP15O95972 392 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 CDC25AP30304 524 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 PHKA2P46019 1235 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 GATMP50440 423 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 FAM102BQ5T8I3 360 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 TRAIPQ9BWF2 469 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 MINDY3Q9H8M7 445 aa16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 PIN4Q9Y237 131 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-216ENST00000530746 C5orf67F2Z3F1 127 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 STX6O43752 255 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 GLRA2P23416 452 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 BMPR1AP36894 532 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 PTENP60484 403 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 RESTQ13127 1097 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 CAPSQ13938 189 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 PAN2Q504Q3 1202 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 MAEAQ7L5Y9 396 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 ECHDC2Q86YB7 292 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 PPM1EQ8WY54 764 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 GPRC5CQ9NQ84 441 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 AGPAT5Q9NUQ2 364 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 MRPL42Q9Y6G3 142 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-216ENST00000530746 A0A0C4DFX4 3053 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 TBKBP1A7MCY6 615 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 H3BNC9 293 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 HOXA2O43364 376 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 EOMESO95936 686 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 RB1P06400 928 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 FGFR1P11362 822 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 CYP11B2P19099 503 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 CTNNB1P35222 781 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 PCBP1Q15365 356 aaKnown RBP eCLIP16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 SLC17A8Q8NDX2 589 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 AK8Q96MA6 479 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 NFKBIZQ9BYH8 718 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 DNM3Q9UQ16 869 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 MYH11P35749 1972 aa16.58■□□□□ 0.24
PPFIA1-216ENST00000530746 E9PMD0 336 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 EYA4O95677 639 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 SKIP12755 728 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 GPM6BQ13491 265 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 HYIQ5T013 277 aa16.57■□□□□ 0.24
PPFIA1-216ENST00000530746 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms