RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ZNF330Q9Y3S2 320 aaPredicted RBP15.22■□□□□ 0.03
PCF11-204ENST00000530660 DAAM1Q9Y4D1 1078 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 A0A0J9YVX5 310 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 CCDC166P0CW27 439 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
PCF11-204ENST00000530660 PHKA1P46020 1223 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 TNFAIP8L3Q5GJ75 292 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 NAP1L3Q99457 506 aaPredicted RBP15.21■□□□□ 0.03
PCF11-204ENST00000530660 PITPNM3Q9BZ71 974 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 ATRNO75882 1429 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 VIL1P09327 827 aaKnown RBP15.21■□□□□ 0.03
PCF11-204ENST00000530660 STX2P32856 288 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 SPATA24Q86W54 205 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 CCDC25Q86WR0 208 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 CYP4X1Q8N118 509 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 ZBTB8BQ8NAP8 495 aaPredicted RBP15.21■□□□□ 0.03
PCF11-204ENST00000530660 KIAA0895Q8NCT3 520 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
PCF11-204ENST00000530660 NID2Q14112 1375 aa15.21■□□□□ 0.03
PCF11-204ENST00000530660 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
PCF11-204ENST00000530660 TMED1Q13445 227 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MTFR1Q15390 333 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 ACSBG2Q5FVE4 666 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 SPDYCQ5MJ68 293 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 HS2ST1Q7LGA3 356 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 ESR2Q92731 530 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 CHD4Q14839 1912 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 LRP6O75581 1613 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 ECE2O60344 883 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 SERPINB3P29508 390 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 UBA7P41226 1012 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 POLGP54098 1239 aaPredicted RBP15.2■□□□□ 0.02
PCF11-204ENST00000530660 CCDC15Q0P6D6 951 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 KPNB1Q14974 876 aaKnown RBP15.2■□□□□ 0.02
PCF11-204ENST00000530660 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 INPP5DQ92835 1189 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MPP4Q96JB8 637 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 AKAP11Q9UKA4 1901 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 RIPK2O43353 540 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MARK3P27448 753 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 FOXN2P32314 431 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
PCF11-204ENST00000530660 GJA8P48165 433 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 BTG3Q14201 252 aaPredicted RBP15.2■□□□□ 0.02
PCF11-204ENST00000530660 ALX1Q15699 326 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 PALB2Q86YC2 1186 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 SPOCK2Q92563 424 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MIPEPQ99797 713 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
PCF11-204ENST00000530660 OR6B1O95007 311 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 WDR60Q8WVS4 1066 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 ORAI2Q96SN7 254 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 STMN4Q9H169 189 aaPredicted RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 PAIP2BQ9ULR5 123 aaKnown RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 KBTBD12Q3ZCT8 623 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 RFX8Q6ZV50 586 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 DCAF5Q96JK2 942 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 ZNF184Q99676 751 aaPredicted RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 CENPKQ9BS16 269 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 SPATA7Q9P0W8 599 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 BARX2Q9UMQ3 279 aaPredicted RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 KIAA0391O15091 583 aaKnown RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 ATP5HO75947 161 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 SLC34A1Q06495 639 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCF11-204ENST00000530660 RASGEF1CQ8N431 466 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 TPCN2Q8NHX9 752 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 NAT14Q8WUY8 206 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 CORO1BQ9BR76 489 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 TRIM9Q9C026 710 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
PCF11-204ENST00000530660 ARHGEF38Q9NXL2 777 aa15.19■□□□□ 0.02
PCF11-204ENST00000530660 PFASO15067 1338 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 MAP3K7O43318 606 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 ACSL3O95573 720 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 LMNAP02545 664 aaKnown RBP15.18■□□□□ 0.02
PCF11-204ENST00000530660 BRAFP15056 766 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 VAV1P15498 845 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 HPCAP84074 193 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 EXOC3L4Q17RC7 722 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms