RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 A0A087WZ62 844 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 LAD1O00515 517 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 ASAP2O43150 1006 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 ATP2B1P20020 1258 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 RPA1P27694 616 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 ZNF174Q15697 407 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 TMEM31Q5JXX7 168 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 RHPN2Q8IUC4 686 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 NLRP7Q8WX94 980 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 PSPC1Q8WXF1 523 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 PLVAPQ9BX97 442 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
CCDC90B-215ENST00000529745 ZBTB39O15060 712 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 DGAT1O75907 488 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 BMPR1AP36894 532 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 PRPHP41219 470 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 RARRES1P49788 294 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 POU5F1BQ06416 359 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 PDIA5Q14554 519 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 EMC2Q15006 297 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 CATSPER3Q86XQ3 398 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 P2RX5Q93086 422 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 MTRQ99707 1265 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 XPNPEP1Q9NQW7 623 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 DBR1Q9UK59 544 aaKnown RBP17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 PCDHB7Q9Y5E2 793 aa17.24■□□□□ 0.35
CCDC90B-215ENST00000529745 SFPQP23246 707 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 TECP42680 631 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 IGSF22Q8N9C0 903 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 RSPH1Q8WYR4 309 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 MRPL38Q96DV4 380 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 PCDHB6Q9Y5E3 794 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
CCDC90B-215ENST00000529745 A0A0U1RQF3 1178 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 HOXA2O43364 376 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 MED24O75448 989 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 EOMESO95936 686 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 PTGDRQ13258 359 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 GPM6BQ13491 265 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 MXD4Q14582 209 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 NBR1Q14596 966 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 ZNF598Q86UK7 904 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 ECHDC2Q86YB7 292 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 PRPF31Q8WWY3 499 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 ZNF668Q96K58 619 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 C11orf84Q9BUA3 381 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 ATP6V0A4Q9HBG4 840 aa17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 MRPL42Q9Y6G3 142 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-215ENST00000529745 CTNNB1P35222 781 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 ARL2P36404 184 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 PTPROQ16827 1216 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 TMEM143Q96AN5 459 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 RAB34Q9BZG1 259 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 RNF19AQ9NV58 838 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 COG5Q9UP83 839 aa17.21■□□□□ 0.35
CCDC90B-215ENST00000529745 H3BQV1 296 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 GPR37L1O60883 481 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 ZNF623O75123 536 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 FGFR4P22455 802 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 ATP2C1P98194 919 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 TFF2Q03403 129 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 LARP1BQ659C4 914 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 PIGOQ8TEQ8 1089 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 TMEM117Q9H0C3 514 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 C11orf16Q9NQ32 467 aa17.2■□□□□ 0.34
CCDC90B-215ENST00000529745 CSDE1O75534 798 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-215ENST00000529745 SKIP12755 728 aa17.19■□□□□ 0.34
CCDC90B-215ENST00000529745 GATMP50440 423 aa17.19■□□□□ 0.34
CCDC90B-215ENST00000529745 RAB27AP51159 221 aa17.19■□□□□ 0.34
CCDC90B-215ENST00000529745 KCNQ1P51787 676 aa17.19■□□□□ 0.34
CCDC90B-215ENST00000529745 PTENP60484 403 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms