RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CDH22Q9UJ99 828 aa10.21□□□□□ -0.77
VPS11-203ENST00000529545 CEP131Q9UPN4 1083 aa10.21□□□□□ -0.77
VPS11-203ENST00000529545 AKT3Q9Y243 479 aa10.21□□□□□ -0.77
VPS11-203ENST00000529545 USTQ9Y2C2 406 aa10.21□□□□□ -0.77
VPS11-203ENST00000529545 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.77
VPS11-203ENST00000529545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.2□□□□□ -0.78
VPS11-203ENST00000529545 GPR32O75388 356 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 C22orf31O95567 290 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 EOMESO95936 686 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 CCNE2O96020 404 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 WEE2P0C1S8 567 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 CHMLP26374 656 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 LIFRP42702 1097 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS11-203ENST00000529545 ADCY7P51828 1080 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
VPS11-203ENST00000529545 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 RIF1Q5UIP0 2472 aaKnown RBP10.2□□□□□ -0.78
VPS11-203ENST00000529545 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 KIAA1841Q6NSI8 718 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 TMTC3Q6ZXV5 915 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 NIPA1Q7RTP0 329 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 OTOP3Q7RTS5 596 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 TRMT1LQ7Z2T5 733 aaKnown RBP10.2□□□□□ -0.78
VPS11-203ENST00000529545 PLA2G4DQ86XP0 818 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 ECHDC2Q86YB7 292 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 CCDC60Q8IWA6 550 aaPredicted RBP10.2□□□□□ -0.78
VPS11-203ENST00000529545 SLC39A11Q8N1S5 342 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 FANCBQ8NB91 859 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 SCLT1Q96NL6 688 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 RTP3Q9BQQ7 232 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 GLT8D2Q9H1C3 349 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 FBXL21Q9UKT6 434 aa10.2□□□□□ -0.78
VPS11-203ENST00000529545 FAM186AA6NE01 2351 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 MYH9P35579 1960 aaKnown RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 IPO5O00410 1097 aaKnown RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 PSAPP07602 524 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 RFX1P22670 979 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 E2F4Q16254 413 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 CABP7Q86V35 215 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 PPFIBP1Q86W92 1011 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 VPS52Q8N1B4 723 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 C12orf76Q8N812 135 aaPredicted RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 RSPH1Q8WYR4 309 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 MAP4K1Q92918 833 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 PGBD1Q96JS3 809 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 SMOC2Q9H3U7 446 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 DACT1Q9NYF0 836 aa10.19□□□□□ -0.78
VPS11-203ENST00000529545 RBM8AQ9Y5S9 174 aaKnown RBP10.19□□□□□ -0.78
VPS11-203ENST00000529545 A0A0U1RQF3 1178 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 SMCO2A6NFE2 343 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 ZBTB42B2RXF5 422 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 hCG_1984214I3L0E3 225 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 SGSM2O43147 1006 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 AOC1P19801 751 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 SREBF1P36956 1147 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 CLCN3P51790 818 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 BCAR1P56945 870 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 TDGQ13569 410 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 ANGPT1Q15389 498 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 WWC2Q6AWC2 1192 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 ZNF746Q6NUN9 644 aaPredicted RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 EFCAB12Q6NXP0 572 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 TMC5Q6UXY8 1006 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 CCDC149Q6ZUS6 474 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 MICU3Q86XE3 530 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 SMAP1Q8IYB5 467 aaPredicted RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 CCDC105Q8IYK2 499 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 ZNF713Q8N859 430 aaPredicted RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 HELQQ8TDG4 1101 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 ZNF577Q9BSK1 485 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 SEMA4AQ9H3S1 761 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 NRBP2Q9NSY0 501 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 TBC1D22BQ9NU19 505 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 RNF19AQ9NV58 838 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 RBM28Q9NW13 759 aaKnown RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 PCDHA10Q9Y5I2 948 aa10.18□□□□□ -0.78
VPS11-203ENST00000529545 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
VPS11-203ENST00000529545 NT5C1B-RDH14C9J2C7 533 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 HRO43593 1189 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 ZC3H11AO75152 810 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS11-203ENST00000529545 SKIP12755 728 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
VPS11-203ENST00000529545 EPCAMP16422 314 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 ATP4AP20648 1035 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 CDC42EP1Q00587 391 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 NONOQ15233 471 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS11-203ENST00000529545 CLLU1OSQ5K130 101 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms