RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 RASA4BC9J798 803 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 COPEO14579 308 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PPP1R12AO14974 1030 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 RASA4O43374 803 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ELF1P32519 619 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 TTC30BQ8N4P2 665 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PDCD6IPQ8WUM4 868 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 SPATA17Q96L03 361 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PITPNM3Q9BZ71 974 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 SYNGAP1Q96PV0 1343 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 LAMC1P11047 1609 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PODXLO00592 558 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 MAPK13O15264 365 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 TRIM49P0CI25 452 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 TRIM49CP0CI26 452 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 EEF1B2P24534 225 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ADORA2BP29275 332 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ARL4CP56559 192 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 BEND6Q5SZJ8 279 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PROM2Q8N271 834 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 HPS3Q969F9 1004 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 EXOC4Q96A65 974 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 OSBPL9Q96SU4 736 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 BPIFA3Q9BQP9 254 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 GNA15P30679 374 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 NME3Q13232 169 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 TWF2Q6IBS0 349 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 CRLF3Q8IUI8 442 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 FBXO41Q8TF61 875 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 EIF2AK1Q9BQI3 630 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ASNSD1Q9NWL6 643 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 NOC2LQ9Y3T9 749 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PLA2R1Q13018 1463 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ABCC3O15438 1527 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PIK3R2O00459 728 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ZRANB2O95218 330 aaKnown RBP eCLIP8.68□□□□□ -1.027e-11■■■■■ 70
CTNND1-220ENST00000529526 STMN1P16949 149 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 LMBRD2Q68DH5 695 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 EMBQ6PCB8 327 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 THEM5Q8N1Q8 247 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 GANCQ8TET4 914 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 FSD1LQ9BXM9 530 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 HOXC10Q9NYD6 342 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PNMA3Q9UL41 463 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 CLTCL1P53675 1640 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 CDHR2Q9BYE9 1310 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 ADCY10Q96PN6 1610 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 CCDC188H7C350 402 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 FTLP02792 175 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 GUCY2CP25092 1073 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PHKA2P46019 1235 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 PMS2P54278 862 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 MAGOHP61326 146 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 EPM2AIP1Q7L775 607 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 TMEM35BQ8NCS4 154 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 CCDC138Q96M89 665 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 GCNAQ96QF7 691 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 DDX47Q9H0S4 455 aaKnown RBP8.68□□□□□ -1.02
CTNND1-220ENST00000529526 SLITRK6Q9H5Y7 841 aa8.68□□□□□ -1.02
CTNND1-220ENST00000529526 KCNQ2O43526 872 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 AKR1B1P15121 316 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 HOXA7P31268 230 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SRRM1Q8IYB3 904 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 MCPH1Q8NEM0 835 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 VPS11Q9H270 941 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SMYD3Q9H7B4 428 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TBC1D22BQ9NU19 505 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PPARGC1AQ9UBK2 798 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 GLI2P10070 1586 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TARBP1Q13395 1621 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 A0A087WUV0 522 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TTC26A0AVF1 554 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 F5H6K3 240 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PPFIA2O75334 1257 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TNFAIP2Q03169 654 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 KLRC3Q07444 240 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 AP1B1Q10567 949 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SPP2Q13103 211 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SPARCL1Q14515 664 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TAF1BQ53T94 588 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 STOX1Q6ZVD7 989 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FRA10AC1Q70Z53 315 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 RASSF3Q86WH2 238 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TTC30AQ86WT1 665 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FBXL13Q8NEE6 735 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 NSUN6Q8TEA1 469 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 LMCD1Q9NZU5 365 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TET3O43151 1660 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 HUS1O60921 280 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 CHGBP05060 677 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 KRT10P13645 584 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PAMP19021 973 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 NAA30Q147X3 362 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms