RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	UBXN2B	Q14CS0	331 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	PCNX4	Q63HM2	1172 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	CELF5	Q8N6W0	485 aa	Known RBP	13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	STAM	Q92783	540 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	FGF14	Q92915	247 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	EVPL	Q92817	2033 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	TENM4	Q6N022	2769 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	CCDC195	A0A1B0GUA6	201 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	B4GALT3	O60512	393 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	RFPL2	O75678	378 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	PARP1	P09874	1014 aa	Known RBP	13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	RPS9	P46781	194 aa	Known RBP	13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	ALDH7A1	P49419	539 aa	Known RBP	13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	MTAP	Q13126	283 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	BMS1	Q14692	1282 aa	Known RBP	13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	SLC44A4	Q53GD3	710 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	CYP26C1	Q6V0L0	522 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	ABI1	Q8IZP0	508 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZNF687	Q8N1G0	1237 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	PI4K2B	Q8TCG2	481 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	HELQ	Q8TDG4	1101 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	GATA6	Q92908	595 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	OSMR	Q99650	979 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	MAN1C1	Q9NR34	630 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	RXFP3	Q9NSD7	469 aa		13.5	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZMYM6	O95789	1325 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	GPR32	O75388	356 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	ITGB5	P18084	799 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	KLRC1	P26715	233 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	KLRC2	P26717	231 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	KIZ	Q2M2Z5	673 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	ODR4	Q5SWX8	454 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	IL31	Q6EBC2	164 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	PARM1	Q6UWI2	310 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	ENAH	Q8N8S7	591 aa	Predicted RBP	13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	TMEM87A	Q8NBN3	555 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	GPRASP2	Q96D09	838 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	MYL10	Q9BUA6	226 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	MYO18B	Q8IUG5	2567 aa		13.49	□□□□□ -0.25
PSMD13-209	ENST00000529372	CFAP46	Q8IYW2	2715 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	SPDYE4	A6NLX3	237 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	TRIM6-TRIM34	B2RNG4	842 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZBTB42	B2RXF5	422 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	INPPL1	O15357	1258 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	KCNK5	O95279	499 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	GALT	P07902	379 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	PC	P11498	1178 aa	Known RBP	13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	CRYBB1	P53674	252 aa	Predicted RBP	13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZBTB41	Q5SVQ8	909 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	PPP1R16B	Q96T49	567 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	KAT14	Q9H8E8	782 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	RAB23	Q9ULC3	237 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	KALRN	O60229	2985 aa		13.48	□□□□□ -0.25
PSMD13-209	ENST00000529372	GREB1	Q4ZG55	1949 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372		A0A0U1RQF3	1178 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	TMEM8B	A6NDV4	472 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	KLRF2	D3W0D1	207 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	SPINK2	P20155	84 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	MAMSTR	Q6ZN01	415 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	MFSD6	Q6ZSS7	791 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	PLPPR4	Q7Z2D5	763 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	NLRX1	Q86UT6	975 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	MIER1	Q8N108	512 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	SMG7	Q92540	1137 aa	Known RBP	13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	PIGS	Q96S52	555 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	EMILIN2	Q9BXX0	1053 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	MRPL9	Q9BYD2	267 aa	Known RBP	13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	NRDE2	Q9H7Z3	1164 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	MAD2L2	Q9UI95	211 aa		13.47	□□□□□ -0.25
PSMD13-209	ENST00000529372	HECTD1	Q9ULT8	2610 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	PALM3	A6NDB9	673 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	HR	O43593	1189 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	CYTH3	O43739	400 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	FOXD2	O60548	495 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	TOP3B	O95985	862 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	MYB	P10242	640 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	CCDC6	Q16204	474 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	PRR23B	Q6ZRT6	265 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	GET4	Q7L5D6	327 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	HOMER1	Q86YM7	354 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	RNF169	Q8NCN4	708 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	ESR2	Q92731	530 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	GPATCH3	Q96I76	525 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	LSM14B	Q9BX40	385 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	PKD2L1	Q9P0L9	805 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	DNAJB4	Q9UDY4	337 aa		13.46	□□□□□ -0.25
PSMD13-209	ENST00000529372	MEIS2	O14770	477 aa		13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	SLC11A1	P49279	550 aa		13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	SRSF5	Q13243	272 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	SF3A2	Q15428	464 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	USP17L6P	Q6QN14	398 aa		13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD13-209	ENST00000529372	ADAM33	Q9BZ11	813 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms