RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 B4GALT5O43286 388 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 FGFR1P11362 822 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 ATF7P17544 494 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 GLRA2P23416 452 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 RPA1P27694 616 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 LAMTOR4Q0VGL1 99 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 DAW1Q8N136 415 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 RC3H2Q9HBD1 1191 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 FBXO2Q9UK22 296 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
CCDC90B-211ENST00000529073 AMHP03971 560 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 HTRA4P83105 476 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 KARSQ15046 597 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 FAM102BQ5T8I3 360 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 DTHD1Q6ZMT9 781 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 NME8Q8N427 588 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 LPPQ93052 612 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 TOP1MTQ969P6 601 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 CPB2Q96IY4 423 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 MTRQ99707 1265 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
CCDC90B-211ENST00000529073 PARNO95453 639 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 ARL2P36404 184 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 RFC5P40937 340 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 PRPHP41219 470 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 MAPK7Q13164 816 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 RAB30Q15771 203 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 RNF149Q8NC42 400 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 NEK9Q8TD19 979 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 MSRAQ9UJ68 235 aa12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-211ENST00000529073 TTC3P53804 2025 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 SFI1A8K8P3 1242 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 C9IYK1 514 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 B4GALT3O60512 393 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 LPXNO60711 386 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 F13A1P00488 732 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 ZSCAN22P10073 491 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 EIF4BP23588 611 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 TMOD1P28289 359 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 PBX3P40426 434 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 AMHR2Q16671 573 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 UBXN11Q5T124 520 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 CABP7Q86V35 215 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 RNF169Q8NCN4 708 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 PSPC1Q8WXF1 523 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 APBB2Q92870 758 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 MRPL42Q9Y6G3 142 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
CCDC90B-211ENST00000529073 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 TRANK1O15050 2925 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 LIG1P18858 919 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 PLCG1P19174 1290 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 PDCP20941 246 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 MBTD1Q05BQ5 628 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 CLLU1OSQ5K130 101 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 TMEM130Q8N3G9 435 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 CCDC43Q96MW1 224 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 YME1L1Q96TA2 773 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 RAD9AQ99638 391 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
CCDC90B-211ENST00000529073 DBR1Q9UK59 544 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms