RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SSX2IPQ9Y2D8 614 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 MYBP10242 640 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
USP47-207ENST00000527733 EARS2Q5JPH6 523 aaKnown RBP16.25■□□□□ 0.19
USP47-207ENST00000527733 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
USP47-207ENST00000527733 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 DDX41Q9UJV9 622 aaKnown RBP16.25■□□□□ 0.19
USP47-207ENST00000527733 A0A1B0GTH6 734 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP47-207ENST00000527733 PGK2P07205 417 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 CCDC144BQ3MJ40 725 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 OATP04181 439 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 IVLP07476 585 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 CIITAP33076 1130 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 ADAT2Q7Z6V5 191 aaKnown RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 DRAP1Q14919 205 aaPredicted RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 IER5Q5VY09 327 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 RSRC2Q7L4I2 434 aaKnown RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 ENOSF1Q7L5Y1 443 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 RHOT2Q8IXI1 618 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 UBE4BO95155 1302 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 VGLL4Q14135 290 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 HAUS1Q96CS2 278 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 SELENOSQ9BQE4 189 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 MOCS3O95396 460 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 EVX2Q03828 476 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 DGKDQ16760 1214 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 ZC2HC1CQ53FD0 456 aaPredicted RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 OR6B2Q6IFH4 312 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 TMEM270Q6UE05 265 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
USP47-207ENST00000527733 P2RX7Q99572 595 aaKnown RBP16.24■□□□□ 0.19
USP47-207ENST00000527733 ERICH1Q86X53 443 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 ZBTB9Q96C00 473 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 A6NJR5 290 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 SLURP2P0DP57 97 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 RGS2P41220 211 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 CROCCP2Q86T23 111 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 HAUS2Q9NVX0 235 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 RNF14Q9UBS8 474 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 INPP5FQ9Y2H2 1132 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 IGSF9BQ9UPX0 1349 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 FCGRTP55899 365 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 NAA35Q5VZE5 725 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 PLEKHA4Q9H4M7 779 aa16.23■□□□□ 0.19
USP47-207ENST00000527733 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
USP47-207ENST00000527733 FTCDO95954 541 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 BRD3Q15059 726 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 RANBP17Q9H2T7 1088 aaKnown RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SYNJ2BP-COX16A0A087WUM0 186 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 PDHXO00330 501 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 HUS1O60921 280 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 TAL1P17542 331 aaPredicted RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 HVCN1Q96D96 273 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 COX16Q9P0S2 106 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 CAPN11Q9UMQ6 739 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 PPP1R3GB7ZBB8 358 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ATP5DP30049 168 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 GABPAQ06546 454 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 PPP1R21Q6ZMI0 780 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 TTC39CQ8N584 583 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 MKNK1Q9BUB5 465 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ADAM22Q9P0K1 906 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 VPS18Q9P253 973 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ZNF148Q9UQR1 794 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ATP8B3O60423 1300 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 GAS2O43903 313 aaKnown RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 RARBP10826 455 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SNRPFP62306 86 aaKnown RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 GNASQ5JWF2 1037 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
USP47-207ENST00000527733 CYP26B1Q9NR63 512 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SCINQ9Y6U3 715 aa16.22■□□□□ 0.19
USP47-207ENST00000527733 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 SCP2P22307 547 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP47-207ENST00000527733 PGM5Q15124 567 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 KAZNQ674X7 775 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 SIX6OS1Q8N1H7 587 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 CCDC63Q8NA47 563 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms