RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TAB2Q9NYJ8 693 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 PCDHA2Q9Y5H9 948 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 MYH11P35749 1972 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 EEF1GP26641 437 aaKnown RBP20.68■□□□□ 0.9
SMPD1-203ENST00000527275 GOLGA8FQ08AF8 430 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 GOLGA8DPQ0D2H9 430 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 CENPPQ6IPU0 288 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 GUF1Q8N442 669 aaKnown RBP20.68■□□□□ 0.9
SMPD1-203ENST00000527275 KLHDC9Q8NEP7 349 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 ZBTB10Q96DT7 871 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 FGFBP2Q9BYJ0 223 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 UNC93B1Q9H1C4 597 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 SEMA6BQ9H3T3 888 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 MAFO75444 373 aaPredicted RBP20.67■□□□□ 0.9
SMPD1-203ENST00000527275 RFC5P40937 340 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 MFSD10Q14728 455 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 CCDC112Q8NEF3 446 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 DRC1Q96MC2 740 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMPD1-203ENST00000527275 TMX1Q9H3N1 280 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 MAGEC2Q9UBF1 373 aaPredicted RBP20.67■□□□□ 0.9
SMPD1-203ENST00000527275 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
SMPD1-203ENST00000527275 KAT6AQ92794 2004 aa20.67■□□□□ 0.9
SMPD1-203ENST00000527275 KPNA6O60684 536 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 GAP43P17677 238 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 MTFR1Q15390 333 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 KCNA10Q16322 511 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 ODR4Q5SWX8 454 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 TMEM143Q96AN5 459 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 PPME1Q9Y570 386 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 HAS3O00219 553 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 ASGR1P07306 291 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 PPFIA1Q13136 1202 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 DRP2Q13474 957 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 LRRC41Q15345 812 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 ZNF484Q5JVG2 852 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 CCSAPQ6IQ19 270 aaPredicted RBP20.66■□□□□ 0.9
SMPD1-203ENST00000527275 MRPL44Q9H9J2 332 aaKnown RBP20.66■□□□□ 0.9
SMPD1-203ENST00000527275 SUGCTQ9HAC7 445 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 OLFML3Q9NRN5 406 aa20.66■□□□□ 0.9
SMPD1-203ENST00000527275 LARSQ9P2J5 1176 aaKnown RBP20.66■□□□□ 0.9
SMPD1-203ENST00000527275 ZEB2O60315 1214 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 CST5P28325 142 aaPredicted RBP20.65■□□□□ 0.9
SMPD1-203ENST00000527275 PSEN2P49810 448 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 CASP5P51878 434 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 ADKP55263 362 aaKnown RBP20.65■□□□□ 0.9
SMPD1-203ENST00000527275 RNF180Q86T96 592 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 TC2NQ8N9U0 490 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 KIFAP3Q92845 792 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 FIZ1Q96SL8 496 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 KATNAL1Q9BW62 490 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 SETD4Q9NVD3 440 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 IGKV6-21A0A0C4DH24 114 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 PLS3P13797 630 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 KLRC1P26715 233 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 GRIK4Q16099 956 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 PPFIBP1Q86W92 1011 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 FAM178BQ8IXR5 827 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 LRRC71Q8N4P6 559 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
SMPD1-203ENST00000527275 KCND1Q9NSA2 647 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 SEL1LQ9UBV2 794 aa20.65■□□□□ 0.9
SMPD1-203ENST00000527275 C22orf31O95567 290 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 KCNJ6P48051 423 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 PEX3P56589 373 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 MKRN4PQ13434 485 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 MARCH8Q5T0T0 291 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 FBXO46Q6PJ61 603 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 FAM114A1Q8IWE2 563 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 MYOCDQ8IZQ8 938 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 CCAR2Q8N163 923 aaKnown RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 METTL13Q8N6R0 699 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 PCSK9Q8NBP7 692 aaKnown RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 LMBR1Q8WVP7 490 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 BSNDQ8WZ55 320 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 POLR3FQ9H1D9 316 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 PAK6Q9NQU5 681 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-203ENST00000527275 EVPLQ92817 2033 aa20.64■□□□□ 0.89
SMPD1-203ENST00000527275 AKR1B15C9JRZ8 316 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-203ENST00000527275 NMT1P30419 496 aaKnown RBP20.63■□□□□ 0.89
SMPD1-203ENST00000527275 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 ITIH6Q6UXX5 1313 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 COL1A2P08123 1366 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 USP27XA6NNY8 438 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 UBXN1Q04323 297 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 RBL2Q08999 1139 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 NRCAMQ92823 1304 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 RNF208Q9H0X6 261 aa20.63■□□□□ 0.89
SMPD1-203ENST00000527275 TRMT1Q9NXH9 659 aaKnown RBP20.63■□□□□ 0.89
SMPD1-203ENST00000527275 SCN10AQ9Y5Y9 1956 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 ARL2P36404 184 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 LRRC63Q05C16 580 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 E4F1Q66K89 784 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 ZNF720Q7Z2F6 126 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 SCFD1Q8WVM8 642 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms