RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-210ENST00000526506 ASAP3Q8TDY4 903 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 LRFN2Q9ULH4 789 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 STXBP5LQ9Y2K9 1186 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 LINC01553A4QN01 128 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 C9IYK1 514 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 E9PMD0 336 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 SLC26A4O43511 780 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 EYA4O95677 639 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 ZSCAN22P10073 491 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-210ENST00000526506 GLRA2P23416 452 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 UBA7P41226 1012 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
HIF3A-210ENST00000526506 POU5F1BQ06416 359 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 HYIQ5T013 277 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 FAM102BQ5T8I3 360 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 CABP7Q86V35 215 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 TGS1Q96RS0 853 aaKnown RBP16.72■□□□□ 0.27
HIF3A-210ENST00000526506 GPRC5CQ9NQ84 441 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 PCDHB7Q9Y5E2 793 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 TTC3P53804 2025 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
HIF3A-210ENST00000526506 ADGRA3Q8IWK6 1321 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 DGKIO75912 1065 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 PTENP60484 403 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 FAM189BP81408 668 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 GRIN1Q05586 938 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 CAPSQ13938 189 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 BECN1Q14457 450 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 ARNTL2Q8WYA1 636 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 MINDY3Q9H8M7 445 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 CERS4Q9HA82 394 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 RC3H2Q9HBD1 1191 aaKnown RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 TMEM161AQ9NX61 479 aa16.71■□□□□ 0.27
HIF3A-210ENST00000526506 PIN4Q9Y237 131 aaKnown RBP16.71■□□□□ 0.27
HIF3A-210ENST00000526506 F13A1P00488 732 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 FOSL2P15408 326 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 ERVK-21P61565 698 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 GRB10Q13322 594 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 BTG3Q14201 252 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 SLC39A14Q15043 492 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 SPRED2Q7Z698 418 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 FIBCD1Q8N539 461 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 ZNF689Q96CS4 500 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 CALML4Q96GE6 196 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 GAS2L1Q99501 681 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 PLIN2Q99541 437 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 FBXO2Q9UK22 296 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
HIF3A-210ENST00000526506 SRPRBQ9Y5M8 271 aaKnown RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-210ENST00000526506 LRRIQ4A6NIV6 560 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 INO80B-WBP1J3KQ70 363 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 ERLIN2O94905 339 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-210ENST00000526506 PKP1Q13835 747 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 TWF2Q6IBS0 349 aaKnown RBP16.69■□□□□ 0.26
HIF3A-210ENST00000526506 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
HIF3A-210ENST00000526506 RASSF8Q8NHQ8 419 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 KIFAP3Q92845 792 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 SAMD11Q96NU1 681 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
HIF3A-210ENST00000526506 CHD9Q3L8U1 2897 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 A0A0U1RQF3 1178 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
HIF3A-210ENST00000526506 MBTD1Q05BQ5 628 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 NCBP1Q09161 790 aaKnown RBP16.68■□□□□ 0.26
HIF3A-210ENST00000526506 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 STK38Q15208 465 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 ECHDC2Q86YB7 292 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 C17orf80Q9BSJ5 609 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
HIF3A-210ENST00000526506 EPOPA6NHQ4 379 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 HOXA2O43364 376 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 TSPAN1O60635 241 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 SKIP12755 728 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 NAMPTP43490 491 aa16.67■□□□□ 0.26
HIF3A-210ENST00000526506 GATMP50440 423 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms