RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 APBB2Q92870 758 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 SCLT1Q96NL6 688 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 IFT122Q9HBG6 1241 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 FAM13BQ9NYF5 915 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 PADI3Q9ULW8 664 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 GPR182O15218 404 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 STAT6P42226 847 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 PAK2Q13177 524 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 CAPSQ13938 189 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 TFDP1Q14186 410 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
SMPD1-202ENST00000526280 E2F4Q16254 413 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 ODR4Q5SWX8 454 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 FAM43BQ6ZT52 329 aaPredicted RBP14.33□□□□□ -0.12
SMPD1-202ENST00000526280 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 GPBP1Q86WP2 473 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 DAW1Q8N136 415 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
SMPD1-202ENST00000526280 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
SMPD1-202ENST00000526280 ERVK-5Q9HDB9 667 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 CXXC1Q9P0U4 656 aaPredicted RBP14.33□□□□□ -0.12
SMPD1-202ENST00000526280 ST3GAL5Q9UNP4 418 aa14.33□□□□□ -0.12
SMPD1-202ENST00000526280 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 EFCAB14O75071 495 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 HIP1RO75146 1068 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 CSDE1O75534 798 aaKnown RBP14.32□□□□□ -0.12
SMPD1-202ENST00000526280 SLC34A2O95436 690 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 FXR1P51114 621 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMPD1-202ENST00000526280 PTENP60484 403 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 NFX1Q12986 1120 aaKnown RBP14.32□□□□□ -0.12
SMPD1-202ENST00000526280 MAPK7Q13164 816 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 SV2BQ7L1I2 683 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 IFNLR1Q8IU57 520 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-202ENST00000526280 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 BSNDQ8WZ55 320 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
SMPD1-202ENST00000526280 KCNH3Q9ULD8 1083 aa14.32□□□□□ -0.12
SMPD1-202ENST00000526280 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 FAM237AA0A1B0GTK4 181 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 A0A1B0GVL5 298 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 POLR2DO15514 142 aaKnown RBP14.31□□□□□ -0.12
SMPD1-202ENST00000526280 NAMPTP43490 491 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 PHKA2P46019 1235 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 RAD51AP2Q09MP3 1159 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 PPP2R5AQ15172 486 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 DHX58Q96C10 678 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 IFT74Q96LB3 600 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 DRC1Q96MC2 740 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
SMPD1-202ENST00000526280 FTHL17Q9BXU8 183 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 MINDY3Q9H8M7 445 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 C17orf75Q9HAS0 396 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 HPSEQ9Y251 543 aa14.31□□□□□ -0.12
SMPD1-202ENST00000526280 MYMKA6NI61 221 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 SFI1A8K8P3 1242 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 ENPP3O14638 875 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 PFKFB1P16118 471 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 FGFR4P22455 802 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 SFPQP23246 707 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMPD1-202ENST00000526280 WDR5P61964 334 aaKnown RBP14.3□□□□□ -0.12
SMPD1-202ENST00000526280 GIT2Q14161 759 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
SMPD1-202ENST00000526280 RTN4RL1Q86UN2 441 aaPredicted RBP14.3□□□□□ -0.12
SMPD1-202ENST00000526280 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 KBTBD4Q9NVX7 518 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 ODF2LQ9ULJ1 636 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 SLC4A7Q9Y6M7 1214 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 MICAL3Q7RTP6 2002 aa14.3□□□□□ -0.12
SMPD1-202ENST00000526280 LAMA2P24043 3122 aaKnown RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 MGEA5O60502 916 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 PLS3P13797 630 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 NPTX2P47972 431 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 KCNJ6P48051 423 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 NDUFA8P51970 172 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 PEX3P56589 373 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 MBTD1Q05BQ5 628 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 DSC3Q14574 896 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 CSPP1Q1MSJ5 1256 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 DEPTORQ8TB45 409 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 PHOSPHO2Q8TCD6 241 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 LINC01599Q8WXQ3 324 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 MRPS27Q92552 414 aaKnown RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 DDX12PQ92771 950 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms