RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 SARSP49591 514 aaKnown RBP14.39□□□□□ -0.11
CTSB-209ENST00000525315 GRIN1Q05586 938 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 SLC39A14Q15043 492 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
CTSB-209ENST00000525315 NPAS4Q8IUM7 802 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 NLRP4Q96MN2 994 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 CDX2Q99626 313 aaPredicted RBP14.39□□□□□ -0.11
CTSB-209ENST00000525315 NT5C3AQ9H0P0 336 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 BHMT2Q9H2M3 363 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 RC3H2Q9HBD1 1191 aaKnown RBP14.39□□□□□ -0.11
CTSB-209ENST00000525315 SRPRBQ9Y5M8 271 aaKnown RBP14.39□□□□□ -0.11
CTSB-209ENST00000525315 RALGAPA2Q2PPJ7 1873 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 COL4A6Q14031 1691 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 TCHHQ07283 1943 aa14.39□□□□□ -0.11
CTSB-209ENST00000525315 DENND3A2RUS2 1198 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 DGKIO75912 1065 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 STAG3L1P0CL83 205 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 SFPQP23246 707 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTSB-209ENST00000525315 GLRA2P23416 452 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 PTENP60484 403 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 GRB10Q13322 594 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 KCNK18Q7Z418 384 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 CABP7Q86V35 215 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 RNF149Q8NC42 400 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 ASAP3Q8TDY4 903 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 NFKBIZQ9BYH8 718 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 POLR3FQ9H1D9 316 aaPredicted RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 MINDY3Q9H8M7 445 aa14.38□□□□□ -0.11
CTSB-209ENST00000525315 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
CTSB-209ENST00000525315 F13A1P00488 732 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
CTSB-209ENST00000525315 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
CTSB-209ENST00000525315 ERVK-21P61565 698 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 PKP1Q13835 747 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 CAPSQ13938 189 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 TFDP1Q14186 410 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 PCBP1Q15365 356 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTSB-209ENST00000525315 TMEM119Q4V9L6 283 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 C1orf186Q6ZWK4 172 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
CTSB-209ENST00000525315 ZNF396Q96N95 335 aaPredicted RBP14.37□□□□□ -0.11
CTSB-209ENST00000525315 YME1L1Q96TA2 773 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 TRAIPQ9BWF2 469 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 GPRC5CQ9NQ84 441 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 PCDHB7Q9Y5E2 793 aa14.37□□□□□ -0.11
CTSB-209ENST00000525315 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
CTSB-209ENST00000525315 UBA7P41226 1012 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 PHKA2P46019 1235 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 CEBPZQ03701 1054 aaKnown RBP14.36□□□□□ -0.11
CTSB-209ENST00000525315 FAM102BQ5T8I3 360 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 RINT1Q6NUQ1 792 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 MAEAQ7L5Y9 396 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 CATSPER4Q7RTX7 472 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 TGS1Q96RS0 853 aaKnown RBP14.36□□□□□ -0.11
CTSB-209ENST00000525315 CSRNP2Q9H175 543 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 DACT1Q9NYF0 836 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
CTSB-209ENST00000525315 STXBP5LQ9Y2K9 1186 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 COL6A3P12111 3177 aa14.36□□□□□ -0.11
CTSB-209ENST00000525315 A0A0U1RQF3 1178 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 EOMESO95936 686 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 SLC12A3P55017 1021 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 BECN1Q14457 450 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 ZRSR1Q15695 479 aaKnown RBP14.35□□□□□ -0.11
CTSB-209ENST00000525315 FOXD4L5Q5VV16 416 aaPredicted RBP14.35□□□□□ -0.11
CTSB-209ENST00000525315 ATL3Q6DD88 541 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 SPRED2Q7Z698 418 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 ZNF598Q86UK7 904 aaKnown RBP14.35□□□□□ -0.11
CTSB-209ENST00000525315 ECHDC2Q86YB7 292 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 FOXD4L4Q8WXT5 416 aaPredicted RBP14.35□□□□□ -0.11
CTSB-209ENST00000525315 MYLIPQ8WY64 445 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 CLIC6Q96NY7 704 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 LRFN2Q9ULH4 789 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 ZDHHC9Q9Y397 364 aa14.35□□□□□ -0.11
CTSB-209ENST00000525315 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 ZNF623O75123 536 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 PPP6R2O75170 966 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 BRD1O95696 1058 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 LINC00271P0C7V0 271 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms