RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SEMA4AQ9H3S1 761 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 GSX1Q9H4S2 264 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-203ENST00000524927 PCOLCE2Q9UKZ9 415 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 TMA7Q9Y2S6 64 aaKnown RBP8.68□□□□□ -1.02
NEDD8-203ENST00000524927 BPTFQ12830 3046 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 DOCK1Q14185 1865 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 HELZ2Q9BYK8 2649 aaKnown RBP8.67□□□□□ -1.02
NEDD8-203ENST00000524927 SNAP23O00161 211 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 DHX15O43143 795 aaKnown RBP8.67□□□□□ -1.02
NEDD8-203ENST00000524927 ELP1O95163 1332 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 RARBP10826 455 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 ACLYP53396 1101 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 TCP10Q12799 353 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 GRB14Q14449 540 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 NKG7Q16617 165 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 HHIPL2Q6UWX4 724 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 UNC5AQ6ZN44 842 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 GDPD5Q8WTR4 605 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 PABPC5Q96DU9 382 aaKnown RBP8.67□□□□□ -1.02
NEDD8-203ENST00000524927 DEPDC7Q96QD5 511 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 POLR3GLQ9BT43 218 aa8.67□□□□□ -1.02
NEDD8-203ENST00000524927 CWC25Q9NXE8 425 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-203ENST00000524927 ARID1BQ8NFD5 2236 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-203ENST00000524927 MAST3O60307 1309 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-203ENST00000524927 TNFRSF10CO14798 259 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 LMNAP02545 664 aaKnown RBP8.66□□□□□ -1.02
NEDD8-203ENST00000524927 PFKMP08237 780 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 GBP1P32455 592 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 CHMP4BP1P59074 171 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
NEDD8-203ENST00000524927 UBE3DQ7Z6J8 389 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 ZFPM1Q8IX07 1006 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 TBC1D22AQ8WUA7 517 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 CCDC74BQ96LY2 380 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 KIF2CQ99661 725 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 YIPF2Q9BWQ6 316 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 SNTG2Q9NY99 539 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 MAPK8IP1Q9UQF2 711 aa8.66□□□□□ -1.02
NEDD8-203ENST00000524927 OTOGLQ3ZCN5 2332 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 GSC2O15499 205 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 TAF5LO75529 589 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 PGK1P00558 417 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 RNF43Q68DV7 783 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 C6orf15Q6UXA7 325 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 FAM126BQ8IXS8 530 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 MICAL1Q8TDZ2 1067 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 FOXQ1Q9C009 403 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 CCDC113Q9H0I3 377 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 CHPF2Q9P2E5 772 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-203ENST00000524927 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.02
NEDD8-203ENST00000524927 FRYLO94915 3013 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 ROBO3Q96MS0 1386 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 A0A1B0GUL6 1792 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 TLDC2A0PJX2 215 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 STXBP3O00186 592 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 GJB6O95452 261 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 CST3P01034 146 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-203ENST00000524927 ZNF746Q6NUN9 644 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-203ENST00000524927 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 DTX1Q86Y01 620 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 HERC6Q8IVU3 1022 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 FAM177A1Q8N128 213 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-203ENST00000524927 KCNG4Q8TDN1 519 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 HIPK3Q9H422 1215 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 ACSS3Q9H6R3 686 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
NEDD8-203ENST00000524927 CTNNA3Q9UI47 895 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 TSPYL4Q9UJ04 414 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 SUGT1Q9Y2Z0 365 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 RABGAP1Q9Y3P9 1069 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 RNF114Q9Y508 228 aa8.64□□□□□ -1.03
NEDD8-203ENST00000524927 TNKSO95271 1327 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 ZZEF1O43149 2961 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 SPEGQ15772 3267 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 MYH3P11055 1940 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 FAM221BA6H8Z2 402 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 ARVCFO00192 962 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 RGS13O14921 159 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 NCK2O43639 380 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 LRIG2O94898 1065 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 CD4P01730 458 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 NFICP08651 508 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 HIBADHP31937 336 aaKnown RBP8.63□□□□□ -1.03
NEDD8-203ENST00000524927 CAP2P40123 477 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
NEDD8-203ENST00000524927 IFRD2Q12894 506 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-203ENST00000524927 TIGD5Q53EQ6 642 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms