RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RAD9AQ99638 391 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 GCOM2Q9BZD3 368 aaPredicted RBP13.3□□□□□ -0.28
CLN8-207ENST00000524258 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 CSRNP2Q9H175 543 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 BLOC1S4Q9NUP1 217 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 AMHP03971 560 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 CA3P07451 260 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
CLN8-207ENST00000524258 HOXA11P31270 313 aaPredicted RBP13.29□□□□□ -0.28
CLN8-207ENST00000524258 SLC12A3P55017 1021 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 TAP1Q03518 808 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 CEBPZQ03701 1054 aaKnown RBP13.29□□□□□ -0.28
CLN8-207ENST00000524258 NFX1Q12986 1120 aaKnown RBP13.29□□□□□ -0.28
CLN8-207ENST00000524258 AMHR2Q16671 573 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 CABP7Q86V35 215 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 MYOCDQ8IZQ8 938 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 NLRP7Q8WX94 980 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 EPSTI1Q96J88 318 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 ADAM2Q99965 735 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 NFKBIZQ9BYH8 718 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 POLR3FQ9H1D9 316 aaPredicted RBP13.29□□□□□ -0.28
CLN8-207ENST00000524258 ZNF576Q9H609 170 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 POLD4Q9HCU8 107 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 RNF19AQ9NV58 838 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 MSRAQ9UJ68 235 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 COL6A3P12111 3177 aa13.29□□□□□ -0.28
CLN8-207ENST00000524258 GBF1Q92538 1859 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 TLL1O43897 1013 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 SRGAP2CP0DJJ0 459 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 ATF7P17544 494 aaPredicted RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 SARSP49591 514 aaKnown RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 GRIN2CQ14957 1233 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 AXDND1Q5T1B0 1012 aaPredicted RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 FAM117BQ6P1L5 589 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 ZNF598Q86UK7 904 aaKnown RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
CLN8-207ENST00000524258 RNF149Q8NC42 400 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 PLIN2Q99541 437 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 TRAIPQ9BWF2 469 aa13.28□□□□□ -0.28
CLN8-207ENST00000524258 MYO9BQ13459 2157 aa13.27□□□□□ -0.28
CLN8-207ENST00000524258 A0A087X0B3 334 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 LINC01553A4QN01 128 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 EPOPA6NHQ4 379 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 PPP6R2O75170 966 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 DGKIO75912 1065 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 SLC34A2O95436 690 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 YEATS4O95619 227 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 PLCG1P19174 1290 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.29
CLN8-207ENST00000524258 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 ODR4Q5SWX8 454 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 UBXN11Q5T124 520 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 CDCA2Q69YH5 1023 aaPredicted RBP13.27□□□□□ -0.29
CLN8-207ENST00000524258 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 MAEAQ7L5Y9 396 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 CHST12Q9NRB3 414 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 RCOR1Q9UKL0 485 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
CLN8-207ENST00000524258 A0A0U1RQF3 1178 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 SPTLC2O15270 562 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 UPP2O95045 317 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 EDN1P05305 212 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 PLA2G4BP0C869 781 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 UBA7P41226 1012 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 GATMP50440 423 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 ATL3Q6DD88 541 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 ECHDC2Q86YB7 292 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 ADGRA3Q8IWK6 1321 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 SYMPKQ92797 1274 aaKnown RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 FAM161BQ96MY7 647 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 ZNF396Q96N95 335 aaPredicted RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 CDX2Q99626 313 aaPredicted RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 INO80BQ9C086 356 aaPredicted RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 FZD8Q9H461 694 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
CLN8-207ENST00000524258 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 C1orf112Q9NSG2 853 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
CLN8-207ENST00000524258 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 TSPAN1O60635 241 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms