RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SEPT10Q9P0V9 454 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 A6NJR5 290 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 MED7O43513 233 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 MED24O75448 989 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 OR6B3Q8NGW1 331 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 ANKRD7Q92527 254 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 FUCA2Q9BTY2 467 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 ATP8A1Q9Y2Q0 1164 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 LTN1O94822 1766 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 ICAM1P05362 532 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 TGFB2P61812 414 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 TRIP13Q15645 432 aaPredicted RBP14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 NFRKBQ6P4R8 1299 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 PLCB1Q9NQ66 1216 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 PACSIN2Q9UNF0 486 aaPredicted RBP14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 SGK1O00141 431 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 TM4SF1P30408 202 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 SETDB1Q15047 1291 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 TERF2Q15554 542 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 C6orf163Q5TEZ5 329 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 MRPL4Q9BYD3 311 aaKnown RBP14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 BUB1BO60566 1050 aaPredicted RBP14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 CYP11B2P19099 503 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 EPHB4P54760 987 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 RAD9BQ6WBX8 426 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 HSPBP1Q9NZL4 362 aa14.07□□□□□ -0.16
PCDHGB1-201ENST00000523390 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 ASB14A6NK59 587 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 ARP10275 920 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 ACOT2P49753 483 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 KLK7P49862 253 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 GNGT1P63211 74 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 PRKCEQ02156 737 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCDC6Q16204 474 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 FBXL13Q8NEE6 735 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 SEPT1Q8WYJ6 367 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 NFIBO00712 420 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 WNT10BO00744 389 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 GYPCP04921 128 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 LRRC4Q9HBW1 653 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 NGRNQ9NPE2 291 aaKnown RBP14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 SLC9A1P19634 815 aa14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 RBM43Q6ZSC3 357 aaKnown RBP14.06□□□□□ -0.16
PCDHGB1-201ENST00000523390 ECEL1O95672 775 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 CDO1Q16878 200 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 CYP4F22Q6NT55 531 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 EDEM3Q9BZQ6 932 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 C2orf40Q9H1Z8 148 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 FAM114A2Q9NRY5 505 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 COPB2P35606 906 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 MNAT1P51948 309 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 GPC5P78333 572 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 CFAP157Q5JU67 520 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 TMEM35BQ8NCS4 154 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 HAUS1Q96CS2 278 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 CD2APQ9Y5K6 639 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 SSTR3P32745 418 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 SREBF1P36956 1147 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 BACE1P56817 501 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 MRPS9P82933 396 aaKnown RBP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 DHX9Q08211 1270 aaKnown RBP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZNF211Q13398 564 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 RUSC1Q9BVN2 902 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 MED4Q9NPJ6 270 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 PITPNM2Q9BZ72 1349 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 ANO9A1A5B4 782 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 ALDH3A1P30838 453 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 RWDD2BP57060 319 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 SNAPC2Q13487 334 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 LGSNQ5TDP6 509 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 TTC19Q6DKK2 380 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 SMC6Q96SB8 1091 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 IDI2Q9BXS1 227 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 UNC45AQ9H3U1 944 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 MAD1L1Q9Y6D9 718 aa14.05□□□□□ -0.16
PCDHGB1-201ENST00000523390 GAKO14976 1311 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 NDC80O14777 642 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 PLS3P13797 630 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 VCAM1P19320 739 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 GPC3P51654 580 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 TAF1CQ15572 869 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms