RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RARS2Q5T160 578 aaKnown RBP25.66■■□□□ 1.7
PVT1-218ENST00000523328 VPS52Q8N1B4 723 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 C12orf76Q8N812 135 aaPredicted RBP25.66■■□□□ 1.7
PVT1-218ENST00000523328 TMEM169Q96HH4 297 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 SCLT1Q96NL6 688 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 NAP1L2Q9ULW6 460 aaPredicted RBP25.66■■□□□ 1.7
PVT1-218ENST00000523328 IRAK3Q9Y616 596 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 SPTBN4Q9H254 2564 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 FAM186AA6NE01 2351 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 CCDC196A0A1B0GTZ2 297 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 MSH4O15457 936 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 ASGR2P07307 311 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 CA8P35219 290 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 TBC1D8BQ0IIM8 1120 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 TARBP2Q15633 366 aaKnown RBP25.65■■□□□ 1.7
PVT1-218ENST00000523328 KIAA1841Q6NSI8 718 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 KANK3Q6NY19 840 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 ZDHHC14Q8IZN3 488 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 NLRP7Q8WX94 980 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 AUTS2Q8WXX7 1259 aa25.65■■□□□ 1.7
PVT1-218ENST00000523328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.64■■□□□ 1.7
PVT1-218ENST00000523328 PRPF3O43395 683 aaKnown RBP25.64■■□□□ 1.7
PVT1-218ENST00000523328 PHKA2P46019 1235 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 KRT32Q14532 448 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 BMS1Q14692 1282 aaKnown RBP25.64■■□□□ 1.7
PVT1-218ENST00000523328 CEP89Q96ST8 783 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 RIT2Q99578 217 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 TRAIPQ9BWF2 469 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 CHST12Q9NRB3 414 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 DZANK1Q9NVP4 752 aa25.64■■□□□ 1.7
PVT1-218ENST00000523328 NID2Q14112 1375 aa25.64■■□□□ 1.69
PVT1-218ENST00000523328 DMDP11532 3685 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 ZC3H11AO75152 810 aaKnown RBP eCLIP25.63■■□□□ 1.69
PVT1-218ENST00000523328 EPCAMP16422 314 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 BMP2KLQ5H9B9 411 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 ASCL5Q7RTU5 278 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 TDRD5Q8NAT2 981 aaKnown RBP25.63■■□□□ 1.69
PVT1-218ENST00000523328 FEZF2Q8TBJ5 459 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 SLC22A17Q8WUG5 538 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 UNC45AQ9H3U1 944 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 LIMD1Q9UGP4 676 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 USTQ9Y2C2 406 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 VPS13AQ96RL7 3174 aa25.63■■□□□ 1.69
PVT1-218ENST00000523328 CHMP2AO43633 222 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 HMGB1P09429 215 aaKnown RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 CTSAP10619 480 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 CPA1P15085 419 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 SFNP31947 248 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 NBL1P41271 181 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 POLGP54098 1239 aaPredicted RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 ATAT1Q5SQI0 421 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 DDX53Q86TM3 631 aaKnown RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 BCL7CQ8WUZ0 217 aaPredicted RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 RSPH1Q8WYR4 309 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 SLC5A5Q92911 643 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 LPPQ93052 612 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 GJA10Q969M2 543 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 IGSF21Q96ID5 467 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 CCDC136Q96JN2 1154 aa25.62■■□□□ 1.69
PVT1-218ENST00000523328 GCOM2Q9BZD3 368 aaPredicted RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 DBR1Q9UK59 544 aaKnown RBP25.62■■□□□ 1.69
PVT1-218ENST00000523328 IGKV6-21A0A0C4DH24 114 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 GAS7O60861 476 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 JAK3P52333 1124 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 GIT2Q14161 759 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 ASTLQ6HA08 431 aaPredicted RBP25.61■■□□□ 1.69
PVT1-218ENST00000523328 PLCD3Q8N3E9 789 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 BICD2Q8TD16 824 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 PHKBQ93100 1093 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 NIFKQ9BYG3 293 aaKnown RBP25.61■■□□□ 1.69
PVT1-218ENST00000523328 NRDE2Q9H7Z3 1164 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 TBC1D13Q9NVG8 400 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 C2orf16Q68DN1 1984 aa25.61■■□□□ 1.69
PVT1-218ENST00000523328 A0A087WZ62 844 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 MEIS3P2A8K0S8 358 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 STBD1O95210 358 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 GALTP07902 379 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 USP11P51784 963 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 FGD1P98174 961 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 CDC42EP1Q00587 391 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 NTRK3Q16288 839 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 LRCH2Q5VUJ6 765 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 Q6ZUG5 572 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 BRF1Q92994 677 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 FDXACB1Q9BRP7 624 aaPredicted RBP25.6■■□□□ 1.69
PVT1-218ENST00000523328 TEKT3Q9BXF9 490 aa25.6■■□□□ 1.69
PVT1-218ENST00000523328 CARNS1A5YM72 827 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 TMEM150BA6NC51 233 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 PRR23AA6NEV1 266 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 PSMD10O75832 226 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 LONRF3Q496Y0 759 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 MTERF2Q49AM1 385 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 TWF2Q6IBS0 349 aaKnown RBP25.59■■□□□ 1.69
PVT1-218ENST00000523328 VN1R3Q9BXE9 311 aa25.59■■□□□ 1.69
PVT1-218ENST00000523328 SEPT9Q9UHD8 586 aaPredicted RBP25.59■■□□□ 1.69
PVT1-218ENST00000523328 SFPQP23246 707 aaKnown RBP eCLIP25.58■■□□□ 1.69
PVT1-218ENST00000523328 XKR3Q5GH77 459 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 NOMO2Q5JPE7 1267 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 B3GNT9Q6UX72 402 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 TMC5Q6UXY8 1006 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms