RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-233	ENST00000521562	PCDHB6	Q9Y5E3	794 aa		10.64	□□□□□ -0.71
PTK2-233	ENST00000521562	COL4A3BP	Q9Y5P4	624 aa		10.64	□□□□□ -0.71
PTK2-233	ENST00000521562	RB1	P06400	928 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	SRGAP2C	P0DJJ0	459 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ZSCAN20	P17040	1043 aa	Predicted RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ATF7	P17544	494 aa	Predicted RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	KCNQ1	P51787	676 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	MRPS5	P82675	430 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	CAMK1	Q14012	370 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ECM1	Q16610	540 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	TCEAL5	Q5H9L2	206 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	CLLU1OS	Q5K130	101 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	LRRC55	Q6ZSA7	311 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ZNF598	Q86UK7	904 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	CATSPER3	Q86XQ3	398 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	RNF169	Q8NCN4	708 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	NEK9	Q8TD19	979 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ASAP3	Q8TDY4	903 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	PSPC1	Q8WXF1	523 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	HLA-C	Q95604	372 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	CASD1	Q96PB1	797 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	MTR	Q99707	1265 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	BACH2	Q9BYV9	841 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	CWH43	Q9H720	699 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ELAC1	Q9H777	363 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	ANKEF1	Q9NU02	776 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	TYW1	Q9NV66	732 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	PLAGL2	Q9UPG8	496 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	RWDD3	Q9Y3V2	267 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	PPME1	Q9Y570	386 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562	TRIO	O75962	3097 aa		10.63	□□□□□ -0.71
PTK2-233	ENST00000521562		A0A0U1RQF3	1178 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	ITGB1	P05556	798 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	SFPQ	P23246	707 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	TRAPPC10	P48553	1259 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	MCM2	P49736	904 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	RARRES1	P49788	294 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	CDC42EP1	Q00587	391 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	PTGDR	Q13258	359 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	ORC2	Q13416	577 aa	Predicted RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	IL17A	Q16552	155 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	PTPRO	Q16827	1216 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	LONRF3	Q496Y0	759 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	SPOUT1	Q5T280	376 aa	Known RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	MCTP1	Q6DN14	999 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	POTEG	Q6S5H5	508 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	CATSPER4	Q7RTX7	472 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	FERMT3	Q86UX7	667 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	KLHL23	Q8NBE8	558 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	SPPL3	Q8TCT6	385 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	TUFT1	Q9NNX1	390 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	NOL7	Q9UMY1	257 aa	Known RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	PIN4	Q9Y237	131 aa	Known RBP	10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	NCOR1	O75376	2440 aa		10.62	□□□□□ -0.71
PTK2-233	ENST00000521562	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	MEIS3P2	A8K0S8	358 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	GAS2	O43903	313 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	USO1	O60763	962 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	BMP1	P13497	986 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	GLRA2	P23416	452 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	RPA1	P27694	616 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	HOXA11	P31270	313 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	IRS1	P35568	1242 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	ARL2	P36404	184 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	PBX3	P40426	434 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	PHKA2	P46019	1235 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	FXR2	P51116	673 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	CAPS	Q13938	189 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	TIGD5	Q53EQ6	642 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	TWF2	Q6IBS0	349 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	MAEA	Q7L5Y9	396 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	EXOC8	Q8IYI6	725 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	COLGALT1	Q8NBJ5	622 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	RNF149	Q8NC42	400 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	HELQ	Q8TDG4	1101 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	POF1B	Q8WVV4	589 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	TCP11	Q8WWU5	503 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	LPP	Q93052	612 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	P2RX5	Q93086	422 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	NECAB3	Q96P71	396 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	PLVAP	Q9BX97	442 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	INO80B	Q9C086	356 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	TMEM117	Q9H0C3	514 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	NSUN3	Q9H649	340 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	UBE2Z	Q9H832	354 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	GPRC5C	Q9NQ84	441 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	CHST12	Q9NRB3	414 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	AGPAT5	Q9NUQ2	364 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	COG5	Q9UP83	839 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	SMC3	Q9UQE7	1217 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	PCDHGC5	Q9Y5F6	944 aa		10.61	□□□□□ -0.71
PTK2-233	ENST00000521562	PP2D1	A8MPX8	630 aa		10.6	□□□□□ -0.71
PTK2-233	ENST00000521562	ASAP2	O43150	1006 aa		10.6	□□□□□ -0.71
PTK2-233	ENST00000521562	DGAT1	O75907	488 aa		10.6	□□□□□ -0.71

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