RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 C9IYK1 514 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 J3QKU1 62 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 GNAT1P11488 350 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 FNTBP49356 437 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 NRLP54845 237 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 KRT17Q04695 432 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 SBK1Q52WX2 424 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 MARCH8Q5T0T0 291 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 RSPO2Q6UXX9 243 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF605Q86T29 641 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF843Q8N446 348 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 FGF14Q92915 247 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 CASD1Q96PB1 797 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 ZBP1Q9H171 429 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 SLKQ9H2G2 1235 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 SPG21Q9NZD8 308 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 HDAC5Q9UQL6 1122 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 IRAK3Q9Y616 596 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 SLC4A4Q9Y6R1 1079 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 LAMA4Q16363 1823 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 NOTCH2Q04721 2471 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 C4orf47A7E2U8 309 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 EIF3JO75822 258 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 ADD2P35612 726 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 FAM189BP81408 668 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 MRPS6P82932 125 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 SATB1Q01826 763 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 SCAPQ12770 1279 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 GAS6Q14393 721 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TMEM266Q2M3C6 531 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TSHZ3Q63HK5 1081 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 RNF43Q68DV7 783 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TCEAL6Q6IPX3 200 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TAF2Q6P1X5 1199 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 PARM1Q6UWI2 310 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TMEM173Q86WV6 379 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 HSCBQ8IWL3 235 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TMEFF1Q8IYR6 380 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 RGS22Q8NE09 1264 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 NSUN6Q8TEA1 469 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 TCEAL3Q969E4 200 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF558Q96NG5 402 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 IWS1Q96ST2 819 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 CHRDQ9H2X0 955 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 IL1RAPL2Q9NP60 686 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 SQORQ9Y6N5 450 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 CLUHO75153 1309 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 PLIN4Q96Q06 1357 aa8.43□□□□□ -1.06
CTNNA1-227ENST00000521387 MBLAC1A4D2B0 266 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 NT5C1B-RDH14C9J2C7 533 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 NR3C2P08235 984 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 CTSAP10619 480 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 CEACAM1P13688 526 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 MX1P20591 662 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 PPM1AP35813 382 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 CLCN4P51793 760 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 ADCY1Q08828 1119 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF444Q8N0Y2 327 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 VPS52Q8N1B4 723 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 RHPN1Q8TCX5 695 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF707Q96C28 371 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 RMDN3Q96TC7 470 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 RHOBTB2Q9BYZ6 727 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 RGS18Q9NS28 235 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 ARPP21Q9UBL0 812 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 RABGEF1Q9UJ41 708 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 IGSF9BQ9UPX0 1349 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 SHROOM3Q8TF72 1996 aa8.42□□□□□ -1.06
CTNNA1-227ENST00000521387 PTPRQQ9UMZ3 2332 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 ASCC3Q8N3C0 2202 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 DOCK6Q96HP0 2047 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 MYH15Q9Y2K3 1946 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 CCDC195A0A1B0GUA6 201 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 GSG1L2A8MUP6 293 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 MINDY4BA8MYZ0 360 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 PYCARD-AS1I3L0S3 204 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 K7ESF4 209 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 GOLIM4O00461 696 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 EIF5BO60841 1220 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 EPN2O95208 641 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 PAPLNO95428 1278 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 EIF2AK2P19525 551 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 CSRP1P21291 193 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 CA8P35219 290 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 RAP1GAPP47736 663 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 TMEM62Q0P6H9 643 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 TTF1Q15361 905 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 TPRG1Q6ZUI0 275 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms