RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 PTENP60484 403 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 WDR5P61964 334 aaKnown RBP15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 CAPSQ13938 189 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 NAALADL2Q58DX5 795 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 FAM102BQ5T8I3 360 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 FAM228AQ86W67 206 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 SLC9A7Q96T83 725 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 FAM13BQ9NYF5 915 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
CTNNA1-226ENST00000521368 A0A087X0B3 334 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 SRGAP2CP0DJJ0 459 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 KCNJ6P48051 423 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 MAPK7Q13164 816 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 ZNF668Q96K58 619 aaPredicted RBP15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 CUEDC2Q9H467 287 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 ODF2LQ9ULJ1 636 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 ST3GAL5Q9UNP4 418 aa15.27■□□□□ 0.04
CTNNA1-226ENST00000521368 HIP1RO75146 1068 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 CMA1P23946 247 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 STAT6P42226 847 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 NAMPTP43490 491 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 MCM6Q14566 821 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 ARSHQ5FYA8 562 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 HABP4Q5JVS0 413 aaKnown RBP15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 CDCA2Q69YH5 1023 aaPredicted RBP15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 DAW1Q8N136 415 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 C2orf40Q9H1Z8 148 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 TMX1Q9H3N1 280 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 KCNG1Q9UIX4 513 aa15.26■□□□□ 0.03
CTNNA1-226ENST00000521368 PTPRSQ13332 1948 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 LAMA2P24043 3122 aaKnown RBP15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 AMHP03971 560 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 SMAD3P84022 425 aaKnown RBP15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 E2F4Q16254 413 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 SV2BQ7L1I2 683 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 PDILTQ8N807 584 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 BSNDQ8WZ55 320 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
CTNNA1-226ENST00000521368 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 LRRIQ4A6NIV6 560 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 ENPP3O14638 875 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 ATP2A2P16615 1042 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 ZNF131P52739 623 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 MBTD1Q05BQ5 628 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 DSC3Q14574 896 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 CSPP1Q1MSJ5 1256 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■□□ 16
CTNNA1-226ENST00000521368 CATSPER4Q7RTX7 472 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 ZBTB8OSQ8IWT0 167 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 REEP2Q9BRK0 252 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 TNMDQ9H2S6 317 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 MINDY3Q9H8M7 445 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 GDPD2Q9HCC8 539 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 RGS18Q9NS28 235 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 C1orf112Q9NSG2 853 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 LARSQ9P2J5 1176 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 HPSEQ9Y251 543 aa15.24■□□□□ 0.03
CTNNA1-226ENST00000521368 LAMA3Q16787 3333 aa15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 DENND3A2RUS2 1198 aa15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 MGEA5O60502 916 aa15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 CSDE1O75534 798 aaKnown RBP15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 PLS3P13797 630 aa15.23■□□□□ 0.03
CTNNA1-226ENST00000521368 PFKFB1P16118 471 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms