RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 ZSCAN20P17040 1043 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 YWHABP31946 246 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 SARSP49591 514 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 NPEPPSP55786 919 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 FAM189BP81408 668 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 GRB10Q13322 594 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 CTTNQ14247 550 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 DSC3Q14574 896 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ZNF174Q15697 407 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 XKR9Q5GH70 373 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 SLC24A5Q71RS6 500 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 TCP11Q8WWU5 503 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 SLC7A3Q8WY07 619 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ADAM2Q99965 735 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 GCOM2Q9BZD3 368 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 TMEM60Q9H2L4 133 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 DHX33Q9H6R0 707 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ANKEF1Q9NU02 776 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 SUCLA2Q9P2R7 463 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 WRAP73Q9P2S5 460 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 LRFN2Q9ULH4 789 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 PCDHB7Q9Y5E2 793 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 C9IYK1 514 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 MGEA5O60502 916 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 RB1P06400 928 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 GJB2P29033 226 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 POLGP54098 1239 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 DRP2Q13474 957 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 BTG3Q14201 252 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 EPC2Q52LR7 807 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 PLA2G4FQ68DD2 849 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 SPRED2Q7Z698 418 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 CMTR2Q8IYT2 770 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 CLP1Q92989 425 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 SH2D3AQ9BRG2 576 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 C17orf80Q9BSJ5 609 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 POLR3CQ9BUI4 534 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 ELAC1Q9H777 363 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 CHST12Q9NRB3 414 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 MTUS1Q9ULD2 1270 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-209ENST00000521167 ADGRA3Q8IWK6 1321 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 KIAA1671Q9BY89 1806 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 H3BNC9 293 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 LAD1O00515 517 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 MUTP22033 750 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 BMPR1AP36894 532 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 PDIA5Q14554 519 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 RHPN2Q8IUC4 686 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 ERMNQ8TAM6 284 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 PPM1EQ8WY54 764 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 PLVAPQ9BX97 442 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 TUFT1Q9NNX1 390 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 DACT1Q9NYF0 836 aa11.61□□□□□ -0.55
TRAPPC9-209ENST00000521167 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 A0A087WZ62 844 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 H3BQV1 296 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 ZBTB39O15060 712 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 HOXA2O43364 376 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 DGAT1O75907 488 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 SPATA31C1P0DKV0 1188 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 SFPQP23246 707 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 RPA1P27694 616 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 TECP42680 631 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 TOB1P50616 345 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 GPM6BQ13491 265 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 CUL4AQ13619 759 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 EMC2Q15006 297 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 PTPROQ16827 1216 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 NAALADL2Q58DX5 795 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 MCTP1Q6DN14 999 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 SRGAP1Q7Z6B7 1085 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 GDPD5Q8WTR4 605 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 PRPF31Q8WWY3 499 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 MTRQ99707 1265 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 FDXACB1Q9BRP7 624 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 ATP6V0A4Q9HBG4 840 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
TRAPPC9-209ENST00000521167 A0A0U1RQF3 1178 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms