RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 STK3Q13188 491 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 BECN1Q14457 450 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 PWP2Q15269 919 aaKnown RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 SAFBQ15424 915 aaKnown RBP eCLIP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 QRICH1Q2TAL8 776 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 TTBK2Q6IQ55 1244 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 TMTC3Q6ZXV5 915 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 FAM177A1Q8N128 213 aaPredicted RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 MSL3Q8N5Y2 521 aaKnown RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 PIBF1Q8WXW3 757 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 SLC26A6Q9BXS9 759 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 ALDH8A1Q9H2A2 487 aaPredicted RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 SPC25Q9HBM1 224 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 C6orf50Q9HD87 102 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 BTBD7Q9P203 1132 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 ZNF214Q9UL59 606 aaPredicted RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 ADAMTS5Q9UNA0 930 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 DIS3Q9Y2L1 958 aaKnown RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 PTPN22Q9Y2R2 807 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.79□□□□□ -1.32
FAM49B-218ENST00000520887 TACC3Q9Y6A5 838 aa6.79□□□□□ -1.32
FAM49B-218ENST00000520887 WDR64B1ANS9 1081 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 TREHO43280 583 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 TIAF1O95411 115 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 CFBP00751 764 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
FAM49B-218ENST00000520887 CPA1P15085 419 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 CNGA1P29973 690 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 ADCY7P51828 1080 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 NLRP5P59047 1200 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 CCT2P78371 535 aaKnown RBP6.78□□□□□ -1.32
FAM49B-218ENST00000520887 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 GRB14Q14449 540 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 DSC3Q14574 896 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 GNPTABQ3T906 1256 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
FAM49B-218ENST00000520887 KIAA1755Q5JYT7 1200 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 ARHGEF16Q5VV41 709 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 RAB11FIP4Q86YS3 637 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 DNERQ8NFT8 737 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 PIGSQ96S52 555 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 TCF12Q99081 682 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 AGXT2Q9BYV1 514 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 PORCNQ9H237 461 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
FAM49B-218ENST00000520887 RIOX1Q9H6W3 641 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 JMJD4Q9H9V9 463 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 LIN7BQ9HAP6 207 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 TXNRD2Q9NNW7 524 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 TAF6LQ9Y6J9 622 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 NID2Q14112 1375 aa6.78□□□□□ -1.32
FAM49B-218ENST00000520887 STK36Q9NRP7 1315 aa6.77□□□□□ -1.32
FAM49B-218ENST00000520887 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 CNMDO75829 334 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 PLEKHA8P1O95397 391 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 FOSP01100 380 aaPredicted RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 SCG2P13521 617 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 DRD2P14416 443 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 IFNAR1P17181 557 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 PDIA3P30101 505 aaKnown RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 GRIA4P48058 902 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 USP11P51784 963 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 AP3B2Q13367 1082 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 SPRED3Q2MJR0 410 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 OLFML2BQ68BL8 750 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 GALNT17Q6IS24 598 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 GIMAP7Q8NHV1 300 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 NSUN6Q8TEA1 469 aaKnown RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 IL17RAQ96F46 866 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 MFSD14AQ96MC6 490 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 NAP1L4Q99733 375 aaKnown RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 LLPHQ9BRT6 129 aaKnown RBP6.77□□□□□ -1.33
FAM49B-218ENST00000520887 MCOLN1Q9GZU1 580 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 PSTPIP2Q9H939 334 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 NRBP1Q9UHY1 535 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
FAM49B-218ENST00000520887 SYNGAP1Q96PV0 1343 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 H3BQV1 296 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 PRPF3O43395 683 aaKnown RBP6.76□□□□□ -1.33
FAM49B-218ENST00000520887 ZEB2O60315 1214 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 PFKFB2O60825 505 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 STAM2O75886 525 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 HOXC6P09630 235 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 AKR1A1P14550 325 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 PDCP20941 246 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 CCND2P30279 289 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 ZNF76P36508 570 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 ANP32AP39687 249 aaKnown RBP6.76□□□□□ -1.33
FAM49B-218ENST00000520887 EVCP57679 992 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 SNAP25P60880 206 aa6.76□□□□□ -1.33
FAM49B-218ENST00000520887 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
FAM49B-218ENST00000520887 STXBP2Q15833 593 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms