RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 MYOCDQ8IZQ8 938 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 ARRDC4Q8NCT1 418 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 RAD54LQ92698 747 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 BADQ92934 168 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 ATG4CQ96DT6 458 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 OSBPL9Q96SU4 736 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 SPATC1LQ9H0A9 340 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 IL17RBQ9NRM6 502 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 STIM2Q9P246 746 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 HDAC6Q9UBN7 1215 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 TRIM10Q9UDY6 481 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 SIK3Q9Y2K2 1263 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 ATXN2Q99700 1313 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 CDH23Q9H251 3354 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 CES2O00748 559 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 MARCH6O60337 910 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 PGK2P07205 417 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 RASA1P20936 1047 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 EIF4A3P38919 411 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 USP8P40818 1118 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 FKBP3Q00688 224 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 COG2Q14746 738 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 SFMBT2Q5VUG0 894 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 LBX2Q6XYB7 198 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 EIF1ADQ8N9N8 165 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 KIAA0895Q8NCT3 520 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 TBCKQ8TEA7 893 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 MYLIPQ8WY64 445 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 TAF4BQ92750 862 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 AGPAT5Q9NUQ2 364 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 HOXC10Q9NYD6 342 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 LTBP2Q14767 1821 aa9.44□□□□□ -0.9
CTNNA1-223ENST00000520520 GOLGA6L10A6NI86 522 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRC53A6NM62 1247 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 RBAK-RBAKDNI3L0D1 243 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SMIM22K7EJ46 135 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 EBAG9O00559 213 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SEPT4O43236 478 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 CYTH3O43739 400 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 N4BP1O75113 896 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 PHACTR2O75167 634 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SYF2O95926 243 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 PGK1P00558 417 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 HOXC6P09630 235 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 AKR1B1P15121 316 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 TECP42680 631 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 GYS2P54840 703 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 NAP1L1P55209 391 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 ICA1Q05084 483 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 STK4Q13043 487 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 ASIC2Q16515 512 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 TMEM119Q4V9L6 283 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 PPP4R3AQ6IN85 833 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 B4GALNT4Q76KP1 1039 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 C10orf67Q8IYJ2 551 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 MAFAQ8NHW3 353 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 CUL5Q93034 780 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 PLIN2Q99541 437 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 CDX2Q99626 313 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 FAM207AQ9NSI2 230 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SLC5A4Q9NY91 659 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 RSPH14Q9UHP6 348 aa9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-223ENST00000520520 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 BTNL10A8MVZ5 291 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 STRNO43815 780 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 PQBP1O60828 265 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 SRGAP2O75044 1071 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 KIAA0754O94854 1291 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MOCS3O95396 460 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 ABL1P00519 1130 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 FCER1AP12319 257 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 GGCXP38435 758 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 TXKP42681 527 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CDK8P49336 464 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CDR1P51861 262 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MRPL12P52815 198 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CORO7P57737 925 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 GRB10Q13322 594 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRC41Q15345 812 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CLUL1Q15846 466 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 FAM26FQ5R3K3 315 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms