RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PLIN2Q99541 437 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 NKX2-4Q9H2Z4 354 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 GPRC5CQ9NQ84 441 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 ZDHHC9Q9Y397 364 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 GBF1Q92538 1859 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 DENND3A2RUS2 1198 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 SPTLC2O15270 562 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 MGEA5O60502 916 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 PPP6R2O75170 966 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 CSDE1O75534 798 aaKnown RBP24.4■■□□□ 1.5
VEGFA-217ENST00000518538 FGFR4P22455 802 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 PHKA2P46019 1235 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 CAPSQ13938 189 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 DSC3Q14574 896 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 FAM102BQ5T8I3 360 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 FAM117BQ6P1L5 589 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 EPSTI1Q96J88 318 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 CLIC6Q96NY7 704 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 RAD9AQ99638 391 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 ADAM2Q99965 735 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 RGS18Q9NS28 235 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 C1orf112Q9NSG2 853 aa24.4■■□□□ 1.5
VEGFA-217ENST00000518538 DAXXQ9UER7 740 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-217ENST00000518538 KARSQ15046 597 aaKnown RBP24.39■■□□□ 1.49
VEGFA-217ENST00000518538 SPECC1Q5M775 1068 aa24.39■■□□□ 1.49
VEGFA-217ENST00000518538 IFNLR1Q8IU57 520 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-217ENST00000518538 RASSF8Q8NHQ8 419 aa24.39■■□□□ 1.49
VEGFA-217ENST00000518538 SYMPKQ92797 1274 aaKnown RBP24.39■■□□□ 1.49
VEGFA-217ENST00000518538 CFAP45Q9UL16 551 aa24.39■■□□□ 1.49
VEGFA-217ENST00000518538 UPP2O95045 317 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 CA3P07451 260 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 ZSCAN20P17040 1043 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 PTENP60484 403 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 HTRA4P83105 476 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 DNM1Q05193 864 aaKnown RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 USP49Q70CQ1 688 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 DEFB123Q8N688 67 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 SYT2Q8N9I0 419 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 KIFAP3Q92845 792 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 RUSC1Q9BVN2 902 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 NFKBIZQ9BYH8 718 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 TTYH1Q9H313 450 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 SLC28A3Q9HAS3 691 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 INSL6Q9Y581 213 aa24.38■■□□□ 1.49
VEGFA-217ENST00000518538 LAMA2P24043 3122 aaKnown RBP24.38■■□□□ 1.49
VEGFA-217ENST00000518538 C9IYK1 514 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 PLA2G4BP0C869 781 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 PLCG1P19174 1290 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 TXLNAP40222 546 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 SARSP49591 514 aaKnown RBP24.37■■□□□ 1.49
VEGFA-217ENST00000518538 SLC12A3P55017 1021 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 PPP2R2DQ66LE6 453 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 RINT1Q6NUQ1 792 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 C1orf186Q6ZWK4 172 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 SLC24A5Q71RS6 500 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 Q7L0L9 218 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 CATSPER4Q7RTX7 472 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 NPAS4Q8IUM7 802 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 KCNG4Q8TDN1 519 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 ZNF576Q9H609 170 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 MINDY3Q9H8M7 445 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 CHST12Q9NRB3 414 aa24.37■■□□□ 1.49
VEGFA-217ENST00000518538 SSBP05455 408 aaKnown RBP eCLIP24.36■■□□□ 1.49
VEGFA-217ENST00000518538 STAG3L1P0CL83 205 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 PCBP1Q15365 356 aaKnown RBP eCLIP24.36■■□□□ 1.496e-7■■□□□ 12.7
VEGFA-217ENST00000518538 CRIPAKQ8N1N5 446 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 YME1L1Q96TA2 773 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 TIPINQ9BVW5 301 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 SEMA6BQ9H3T3 888 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 BLOC1S4Q9NUP1 217 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 RNF216Q9NWF9 866 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-217ENST00000518538 KCND2Q9NZV8 630 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 CCDC39Q9UFE4 941 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 ATP6V1DQ9Y5K8 247 aa24.36■■□□□ 1.49
VEGFA-217ENST00000518538 TTC3P53804 2025 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 LCHNA4D1U4 455 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 LRRIQ4A6NIV6 560 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 GUCY2CP25092 1073 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 NAMPTP43490 491 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 PPP2R5AQ15172 486 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 LRRC15Q8TF66 581 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 BSNDQ8WZ55 320 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 AGPAT5Q9NUQ2 364 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 DACT1Q9NYF0 836 aa24.35■■□□□ 1.49
VEGFA-217ENST00000518538 PIN4Q9Y237 131 aaKnown RBP24.35■■□□□ 1.49
VEGFA-217ENST00000518538 COL4A6Q14031 1691 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 CUTAO60888 179 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 DDIT3P35638 169 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 FAM189BP81408 668 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 MBTD1Q05BQ5 628 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 CDCA2Q69YH5 1023 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-217ENST00000518538 SP7Q8TDD2 431 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-217ENST00000518538 RAD54LQ92698 747 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 IFT74Q96LB3 600 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 DRC1Q96MC2 740 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 FAM161BQ96MY7 647 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 LRFN2Q9ULH4 789 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 PCDHB7Q9Y5E2 793 aa24.34■■□□□ 1.49
VEGFA-217ENST00000518538 INO80B-WBP1J3KQ70 363 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 HIP1RO75146 1068 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms